Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
Smarcd1Q61466 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC14.12□□□□□ -0.15
Smarcd1Q61466 Gm9755-201ENSMUST00000032981 1356 ntBASIC14.12□□□□□ -0.15
Smarcd1Q61466 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smarcd1Q61466 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smarcd1Q61466 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smarcd1Q61466 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smarcd1Q61466 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smarcd1Q61466 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smarcd1Q61466 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smarcd1Q61466 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smarcd1Q61466 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Smarcd1Q61466 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smarcd1Q61466 Mup-ps23-201ENSMUST00000118063 630 ntBASIC14.12□□□□□ -0.15
Smarcd1Q61466 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC14.12□□□□□ -0.15
Smarcd1Q61466 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC14.12□□□□□ -0.15
Smarcd1Q61466 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Smarcd1Q61466 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Smarcd1Q61466 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Smarcd1Q61466 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC14.12□□□□□ -0.15
Smarcd1Q61466 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC14.12□□□□□ -0.15
Smarcd1Q61466 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC14.12□□□□□ -0.15
Smarcd1Q61466 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Smarcd1Q61466 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC14.12□□□□□ -0.15
Smarcd1Q61466 Gm38671-201ENSMUST00000200573 130 ntBASIC14.12□□□□□ -0.15
Smarcd1Q61466 Gm7067-201ENSMUST00000207698 1249 ntBASIC14.12□□□□□ -0.15
Smarcd1Q61466 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smarcd1Q61466 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Smarcd1Q61466 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smarcd1Q61466 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Smarcd1Q61466 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smarcd1Q61466 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC14.12□□□□□ -0.15
Smarcd1Q61466 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smarcd1Q61466 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smarcd1Q61466 Gm8131-201ENSMUST00000213783 1570 ntBASIC14.12□□□□□ -0.15
Smarcd1Q61466 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smarcd1Q61466 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smarcd1Q61466 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smarcd1Q61466 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smarcd1Q61466 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smarcd1Q61466 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smarcd1Q61466 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Smarcd1Q61466 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smarcd1Q61466 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smarcd1Q61466 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smarcd1Q61466 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smarcd1Q61466 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Smarcd1Q61466 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smarcd1Q61466 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smarcd1Q61466 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Smarcd1Q61466 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Smarcd1Q61466 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Smarcd1Q61466 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Smarcd1Q61466 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smarcd1Q61466 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smarcd1Q61466 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smarcd1Q61466 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smarcd1Q61466 Gm13612-201ENSMUST00000119276 390 ntBASIC14.11□□□□□ -0.15
Smarcd1Q61466 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC14.11□□□□□ -0.15
Smarcd1Q61466 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC14.11□□□□□ -0.15
Smarcd1Q61466 Gm27839-201ENSMUST00000184242 106 ntBASIC14.11□□□□□ -0.15
Smarcd1Q61466 Gm27486-201ENSMUST00000184923 80 ntBASIC14.11□□□□□ -0.15
Smarcd1Q61466 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smarcd1Q61466 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Smarcd1Q61466 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC14.11□□□□□ -0.15
Smarcd1Q61466 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC14.11□□□□□ -0.15
Smarcd1Q61466 Itm2b-204ENSMUST00000228637 783 ntBASIC14.11□□□□□ -0.15
Smarcd1Q61466 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smarcd1Q61466 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smarcd1Q61466 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smarcd1Q61466 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smarcd1Q61466 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
Smarcd1Q61466 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Smarcd1Q61466 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smarcd1Q61466 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smarcd1Q61466 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Smarcd1Q61466 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Smarcd1Q61466 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smarcd1Q61466 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smarcd1Q61466 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Smarcd1Q61466 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smarcd1Q61466 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC14.11□□□□□ -0.15
Smarcd1Q61466 Ankra2-208ENSMUST00000226100 1476 ntBASIC14.11□□□□□ -0.15
Smarcd1Q61466 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC14.11□□□□□ -0.15
Smarcd1Q61466 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Smarcd1Q61466 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smarcd1Q61466 Gm38197-201ENSMUST00000192320 2122 ntBASIC14.11□□□□□ -0.15
Smarcd1Q61466 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Smarcd1Q61466 Gm12626-201ENSMUST00000117339 1983 ntBASIC14.11□□□□□ -0.15
Smarcd1Q61466 Gm12623-201ENSMUST00000119849 1983 ntBASIC14.11□□□□□ -0.15
Smarcd1Q61466 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smarcd1Q61466 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smarcd1Q61466 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Smarcd1Q61466 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smarcd1Q61466 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smarcd1Q61466 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smarcd1Q61466 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Smarcd1Q61466 Gm5687-201ENSMUST00000118252 640 ntBASIC14.1□□□□□ -0.15
Smarcd1Q61466 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC14.1□□□□□ -0.15
Smarcd1Q61466 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms