Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Col11a1Q61245 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col11a1Q61245 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
Col11a1Q61245 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Col11a1Q61245 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col11a1Q61245 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Col11a1Q61245 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col11a1Q61245 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Col11a1Q61245 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Col11a1Q61245 Gm37737-201ENSMUST00000195013 1638 ntBASIC14.88□□□□□ -0.03
Col11a1Q61245 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col11a1Q61245 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col11a1Q61245 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col11a1Q61245 Gm11930-201ENSMUST00000117788 190 ntBASIC14.88□□□□□ -0.03
Col11a1Q61245 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Col11a1Q61245 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col11a1Q61245 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col11a1Q61245 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col11a1Q61245 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col11a1Q61245 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Col11a1Q61245 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col11a1Q61245 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col11a1Q61245 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
Col11a1Q61245 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col11a1Q61245 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col11a1Q61245 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
Col11a1Q61245 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col11a1Q61245 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col11a1Q61245 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col11a1Q61245 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Col11a1Q61245 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Col11a1Q61245 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col11a1Q61245 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC14.87□□□□□ -0.03
Col11a1Q61245 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Col11a1Q61245 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC14.87□□□□□ -0.03
Col11a1Q61245 Gm12380-201ENSMUST00000119012 544 ntBASIC14.87□□□□□ -0.03
Col11a1Q61245 Gm8566-201ENSMUST00000120174 465 ntBASIC14.87□□□□□ -0.03
Col11a1Q61245 Gm9550-201ENSMUST00000161130 862 ntBASIC14.87□□□□□ -0.03
Col11a1Q61245 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Col11a1Q61245 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC14.87□□□□□ -0.03
Col11a1Q61245 Rprl1-202ENSMUST00000198476 238 ntBASIC14.87□□□□□ -0.03
Col11a1Q61245 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col11a1Q61245 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col11a1Q61245 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Col11a1Q61245 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col11a1Q61245 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC14.87□□□□□ -0.03
Col11a1Q61245 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Col11a1Q61245 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC14.87□□□□□ -0.03
Col11a1Q61245 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Col11a1Q61245 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col11a1Q61245 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col11a1Q61245 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC14.87□□□□□ -0.03
Col11a1Q61245 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Col11a1Q61245 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
Col11a1Q61245 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Col11a1Q61245 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Col11a1Q61245 Gm27552-201ENSMUST00000183351 62 ntBASIC14.87□□□□□ -0.03
Col11a1Q61245 Gm27844-201ENSMUST00000183613 62 ntBASIC14.87□□□□□ -0.03
Col11a1Q61245 Gm44545-201ENSMUST00000208262 746 ntBASIC14.87□□□□□ -0.03
Col11a1Q61245 D9Wsu149-201ENSMUST00000214169 594 ntBASIC14.87□□□□□ -0.03
Col11a1Q61245 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Col11a1Q61245 Mmp14-206ENSMUST00000225641 3238 ntBASIC14.87□□□□□ -0.03
Col11a1Q61245 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Col11a1Q61245 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC14.86□□□□□ -0.03
Col11a1Q61245 Gm7789-202ENSMUST00000211273 1400 ntBASIC14.86□□□□□ -0.03
Col11a1Q61245 Gm43273-201ENSMUST00000199649 2594 ntBASIC14.86□□□□□ -0.03
Col11a1Q61245 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col11a1Q61245 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col11a1Q61245 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Col11a1Q61245 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col11a1Q61245 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Col11a1Q61245 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col11a1Q61245 Gm12286-201ENSMUST00000119246 1002 ntBASIC14.86□□□□□ -0.03
Col11a1Q61245 Gm11667-201ENSMUST00000119828 486 ntBASIC14.86□□□□□ -0.03
Col11a1Q61245 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC14.86□□□□□ -0.03
Col11a1Q61245 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Col11a1Q61245 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Col11a1Q61245 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col11a1Q61245 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC14.86□□□□□ -0.03
Col11a1Q61245 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC14.86□□□□□ -0.03
Col11a1Q61245 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Col11a1Q61245 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC14.86□□□□□ -0.03
Col11a1Q61245 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC14.86□□□□□ -0.03
Col11a1Q61245 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col11a1Q61245 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col11a1Q61245 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col11a1Q61245 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col11a1Q61245 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col11a1Q61245 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Col11a1Q61245 Gm10605-202ENSMUST00000183019 3198 ntBASIC14.86□□□□□ -0.03
Col11a1Q61245 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col11a1Q61245 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col11a1Q61245 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col11a1Q61245 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col11a1Q61245 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Col11a1Q61245 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Col11a1Q61245 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Col11a1Q61245 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC14.85□□□□□ -0.03
Col11a1Q61245 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC14.85□□□□□ -0.03
Col11a1Q61245 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms