Protein–RNA interactions for Protein: Q60688

Foxd4, Forkhead box protein D4, mousemouse

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd4Q60688 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Foxd4Q60688 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Foxd4Q60688 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.18□□□□□ -0.14
Foxd4Q60688 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Foxd4Q60688 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Foxd4Q60688 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Foxd4Q60688 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Foxd4Q60688 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Foxd4Q60688 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Foxd4Q60688 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Foxd4Q60688 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Foxd4Q60688 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC14.17□□□□□ -0.14
Foxd4Q60688 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Foxd4Q60688 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Foxd4Q60688 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Foxd4Q60688 Gm13615-201ENSMUST00000120242 1612 ntBASIC14.17□□□□□ -0.14
Foxd4Q60688 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Foxd4Q60688 Gm6938-201ENSMUST00000123014 771 ntTSL 3 BASIC14.17□□□□□ -0.14
Foxd4Q60688 Gm12205-201ENSMUST00000133940 575 ntTSL 5 BASIC14.17□□□□□ -0.14
Foxd4Q60688 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC14.17□□□□□ -0.14
Foxd4Q60688 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Foxd4Q60688 Gm16112-201ENSMUST00000159075 382 ntBASIC14.17□□□□□ -0.14
Foxd4Q60688 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Foxd4Q60688 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC14.17□□□□□ -0.14
Foxd4Q60688 Gm5277-201ENSMUST00000164923 556 ntBASIC14.17□□□□□ -0.14
Foxd4Q60688 Gm37751-201ENSMUST00000192440 1198 ntBASIC14.17□□□□□ -0.14
Foxd4Q60688 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Foxd4Q60688 Gm43125-201ENSMUST00000201724 730 ntBASIC14.17□□□□□ -0.14
Foxd4Q60688 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Foxd4Q60688 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Foxd4Q60688 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC14.17□□□□□ -0.14
Foxd4Q60688 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC14.17□□□□□ -0.14
Foxd4Q60688 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Foxd4Q60688 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Foxd4Q60688 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Foxd4Q60688 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Foxd4Q60688 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Foxd4Q60688 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Foxd4Q60688 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Foxd4Q60688 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Foxd4Q60688 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Foxd4Q60688 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Foxd4Q60688 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Foxd4Q60688 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Foxd4Q60688 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC14.16□□□□□ -0.14
Foxd4Q60688 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Foxd4Q60688 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Foxd4Q60688 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Foxd4Q60688 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Foxd4Q60688 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Foxd4Q60688 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Foxd4Q60688 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Foxd4Q60688 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Foxd4Q60688 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC14.16□□□□□ -0.14
Foxd4Q60688 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Foxd4Q60688 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Foxd4Q60688 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Foxd4Q60688 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Foxd4Q60688 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC14.16□□□□□ -0.14
Foxd4Q60688 Rprl2-201ENSMUST00000157150 290 ntBASIC14.16□□□□□ -0.14
Foxd4Q60688 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC14.16□□□□□ -0.14
Foxd4Q60688 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Foxd4Q60688 Gm10925-201ENSMUST00000189941 678 ntBASIC14.16□□□□□ -0.14
Foxd4Q60688 Gm38197-201ENSMUST00000192320 2122 ntBASIC14.16□□□□□ -0.14
Foxd4Q60688 Gm38225-201ENSMUST00000194001 393 ntBASIC14.16□□□□□ -0.14
Foxd4Q60688 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC14.16□□□□□ -0.14
Foxd4Q60688 AC140397.2-201ENSMUST00000224213 834 ntBASIC14.16□□□□□ -0.14
Foxd4Q60688 Wdyhv1-206ENSMUST00000227142 786 ntBASIC14.16□□□□□ -0.14
Foxd4Q60688 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Foxd4Q60688 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC14.16□□□□□ -0.14
Foxd4Q60688 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Foxd4Q60688 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Foxd4Q60688 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Foxd4Q60688 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Foxd4Q60688 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Foxd4Q60688 Gm5422-201ENSMUST00000050717 2721 ntBASIC14.16□□□□□ -0.14
Foxd4Q60688 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Foxd4Q60688 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Foxd4Q60688 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Foxd4Q60688 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Foxd4Q60688 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Foxd4Q60688 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Foxd4Q60688 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Foxd4Q60688 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Foxd4Q60688 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Foxd4Q60688 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Foxd4Q60688 Tnf-201ENSMUST00000025263 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Foxd4Q60688 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC14.15□□□□□ -0.14
Foxd4Q60688 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Foxd4Q60688 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Foxd4Q60688 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Foxd4Q60688 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Foxd4Q60688 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Foxd4Q60688 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Foxd4Q60688 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Foxd4Q60688 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Foxd4Q60688 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Foxd4Q60688 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Foxd4Q60688 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Foxd4Q60688 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms