Protein–RNA interactions for Protein: Q60598

Cttn, Src substrate cortactin, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CttnQ60598 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CttnQ60598 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CttnQ60598 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CttnQ60598 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CttnQ60598 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CttnQ60598 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC14.29□□□□□ -0.12
CttnQ60598 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CttnQ60598 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CttnQ60598 AC162801.1-201ENSMUST00000220612 198 ntBASIC14.29□□□□□ -0.12
CttnQ60598 AC192088.1-201ENSMUST00000227561 301 ntBASIC14.29□□□□□ -0.12
CttnQ60598 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
CttnQ60598 Gm30238-201ENSMUST00000195528 2603 ntBASIC14.29□□□□□ -0.12
CttnQ60598 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CttnQ60598 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CttnQ60598 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CttnQ60598 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CttnQ60598 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC14.29□□□□□ -0.12
CttnQ60598 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CttnQ60598 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CttnQ60598 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CttnQ60598 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CttnQ60598 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CttnQ60598 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CttnQ60598 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CttnQ60598 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CttnQ60598 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CttnQ60598 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CttnQ60598 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CttnQ60598 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.28□□□□□ -0.12
CttnQ60598 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC14.28□□□□□ -0.12
CttnQ60598 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CttnQ60598 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CttnQ60598 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CttnQ60598 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC14.28□□□□□ -0.12
CttnQ60598 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CttnQ60598 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CttnQ60598 Gm13689-201ENSMUST00000119360 685 ntBASIC14.28□□□□□ -0.12
CttnQ60598 Gm15163-201ENSMUST00000120749 1302 ntBASIC14.28□□□□□ -0.12
CttnQ60598 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC14.28□□□□□ -0.12
CttnQ60598 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC14.28□□□□□ -0.12
CttnQ60598 Gm26464-201ENSMUST00000157094 305 ntBASIC14.28□□□□□ -0.12
CttnQ60598 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC14.28□□□□□ -0.12
CttnQ60598 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CttnQ60598 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CttnQ60598 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC14.28□□□□□ -0.12
CttnQ60598 Gm27772-201ENSMUST00000184900 187 ntBASIC14.28□□□□□ -0.12
CttnQ60598 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
CttnQ60598 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC14.28□□□□□ -0.12
CttnQ60598 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC14.28□□□□□ -0.12
CttnQ60598 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC14.28□□□□□ -0.12
CttnQ60598 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CttnQ60598 Gm21038-201ENSMUST00000222205 1383 ntBASIC14.28□□□□□ -0.12
CttnQ60598 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CttnQ60598 Il17rd-203ENSMUST00000225146 3366 ntBASIC14.28□□□□□ -0.12
CttnQ60598 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CttnQ60598 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CttnQ60598 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CttnQ60598 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
CttnQ60598 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CttnQ60598 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CttnQ60598 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CttnQ60598 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
CttnQ60598 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CttnQ60598 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CttnQ60598 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC14.28□□□□□ -0.12
CttnQ60598 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CttnQ60598 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC14.28□□□□□ -0.12
CttnQ60598 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CttnQ60598 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CttnQ60598 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CttnQ60598 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CttnQ60598 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC14.27□□□□□ -0.12
CttnQ60598 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC14.27□□□□□ -0.12
CttnQ60598 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CttnQ60598 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC14.27□□□□□ -0.12
CttnQ60598 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CttnQ60598 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CttnQ60598 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CttnQ60598 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CttnQ60598 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
CttnQ60598 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC14.27□□□□□ -0.13
CttnQ60598 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC14.27□□□□□ -0.13
CttnQ60598 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
CttnQ60598 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CttnQ60598 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC14.27□□□□□ -0.13
CttnQ60598 Gm18934-201ENSMUST00000216671 1044 ntBASIC14.27□□□□□ -0.13
CttnQ60598 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CttnQ60598 AC131997.1-201ENSMUST00000228611 1229 ntBASIC14.27□□□□□ -0.13
CttnQ60598 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CttnQ60598 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC14.27□□□□□ -0.13
CttnQ60598 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CttnQ60598 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CttnQ60598 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CttnQ60598 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
CttnQ60598 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
CttnQ60598 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
CttnQ60598 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
CttnQ60598 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CttnQ60598 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CttnQ60598 Gm20632-201ENSMUST00000176760 2427 ntBASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 77.3 ms