Protein–RNA interactions for Protein: Q3UPH7

Arhgef40, Rho guanine nucleotide exchange factor 40, mousemouse

Predictions only

Length 1,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef40Q3UPH7 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Arhgef40Q3UPH7 AC167669.2-201ENSMUST00000224417 1620 ntBASIC19.62■□□□□ 0.73
Arhgef40Q3UPH7 Gm5466-201ENSMUST00000119395 1890 ntBASIC19.62■□□□□ 0.73
Arhgef40Q3UPH7 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Arhgef40Q3UPH7 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Arhgef40Q3UPH7 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Arhgef40Q3UPH7 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
Arhgef40Q3UPH7 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Arhgef40Q3UPH7 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC19.62■□□□□ 0.73
Arhgef40Q3UPH7 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Arhgef40Q3UPH7 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Arhgef40Q3UPH7 Gm24830-201ENSMUST00000102024 166 ntBASIC19.61■□□□□ 0.73
Arhgef40Q3UPH7 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Arhgef40Q3UPH7 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Arhgef40Q3UPH7 Gm25890-201ENSMUST00000177643 165 ntBASIC19.61■□□□□ 0.73
Arhgef40Q3UPH7 Rnu1b2-201ENSMUST00000178073 165 ntBASIC19.61■□□□□ 0.73
Arhgef40Q3UPH7 Rnu1b1-201ENSMUST00000178250 165 ntBASIC19.61■□□□□ 0.73
Arhgef40Q3UPH7 Gm22614-201ENSMUST00000178300 165 ntBASIC19.61■□□□□ 0.73
Arhgef40Q3UPH7 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC19.61■□□□□ 0.73
Arhgef40Q3UPH7 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Arhgef40Q3UPH7 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Arhgef40Q3UPH7 Gm22042-201ENSMUST00000082989 165 ntBASIC19.61■□□□□ 0.73
Arhgef40Q3UPH7 Gm26232-201ENSMUST00000083360 166 ntBASIC19.61■□□□□ 0.73
Arhgef40Q3UPH7 Gm24136-201ENSMUST00000083374 165 ntBASIC19.61■□□□□ 0.73
Arhgef40Q3UPH7 Rnu1b6-201ENSMUST00000083839 166 ntBASIC19.61■□□□□ 0.73
Arhgef40Q3UPH7 Gm26110-201ENSMUST00000083971 165 ntBASIC19.61■□□□□ 0.73
Arhgef40Q3UPH7 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Arhgef40Q3UPH7 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Arhgef40Q3UPH7 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Arhgef40Q3UPH7 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Arhgef40Q3UPH7 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Arhgef40Q3UPH7 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Arhgef40Q3UPH7 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Arhgef40Q3UPH7 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Arhgef40Q3UPH7 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Arhgef40Q3UPH7 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Arhgef40Q3UPH7 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
Arhgef40Q3UPH7 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Arhgef40Q3UPH7 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC19.61■□□□□ 0.73
Arhgef40Q3UPH7 Gm9004-201ENSMUST00000218739 1222 ntBASIC19.61■□□□□ 0.73
Arhgef40Q3UPH7 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Arhgef40Q3UPH7 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Arhgef40Q3UPH7 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Arhgef40Q3UPH7 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Arhgef40Q3UPH7 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Arhgef40Q3UPH7 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Arhgef40Q3UPH7 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Arhgef40Q3UPH7 AC139054.1-201ENSMUST00000226898 1598 ntBASIC19.6■□□□□ 0.73
Arhgef40Q3UPH7 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Arhgef40Q3UPH7 Gm44775-201ENSMUST00000207266 1456 ntBASIC19.6■□□□□ 0.73
Arhgef40Q3UPH7 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Arhgef40Q3UPH7 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Arhgef40Q3UPH7 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Arhgef40Q3UPH7 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Arhgef40Q3UPH7 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC19.6■□□□□ 0.73
Arhgef40Q3UPH7 Gm23270-201ENSMUST00000104055 131 ntBASIC19.6■□□□□ 0.73
Arhgef40Q3UPH7 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Arhgef40Q3UPH7 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Arhgef40Q3UPH7 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Arhgef40Q3UPH7 Gm12715-201ENSMUST00000121430 1128 ntBASIC19.6■□□□□ 0.73
Arhgef40Q3UPH7 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Arhgef40Q3UPH7 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Arhgef40Q3UPH7 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Arhgef40Q3UPH7 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Arhgef40Q3UPH7 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Arhgef40Q3UPH7 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Arhgef40Q3UPH7 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Arhgef40Q3UPH7 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC19.6■□□□□ 0.73
Arhgef40Q3UPH7 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC19.6■□□□□ 0.73
Arhgef40Q3UPH7 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Arhgef40Q3UPH7 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Arhgef40Q3UPH7 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Arhgef40Q3UPH7 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Arhgef40Q3UPH7 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Arhgef40Q3UPH7 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Arhgef40Q3UPH7 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Arhgef40Q3UPH7 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Arhgef40Q3UPH7 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Arhgef40Q3UPH7 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Arhgef40Q3UPH7 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Arhgef40Q3UPH7 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
Arhgef40Q3UPH7 Gm14017-201ENSMUST00000121934 386 ntBASIC19.59■□□□□ 0.73
Arhgef40Q3UPH7 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Arhgef40Q3UPH7 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC19.59■□□□□ 0.73
Arhgef40Q3UPH7 AC135669.1-202ENSMUST00000216742 540 ntBASIC19.59■□□□□ 0.73
Arhgef40Q3UPH7 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC19.59■□□□□ 0.73
Arhgef40Q3UPH7 Abhd11os-203ENSMUST00000222613 363 ntBASIC19.59■□□□□ 0.73
Arhgef40Q3UPH7 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Arhgef40Q3UPH7 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Arhgef40Q3UPH7 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Arhgef40Q3UPH7 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Arhgef40Q3UPH7 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Arhgef40Q3UPH7 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Arhgef40Q3UPH7 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Arhgef40Q3UPH7 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Arhgef40Q3UPH7 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Arhgef40Q3UPH7 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Arhgef40Q3UPH7 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Arhgef40Q3UPH7 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Arhgef40Q3UPH7 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 73.6 ms