Protein–RNA interactions for Protein: Q08EE8

1700061G19Rik, RIKEN cDNA 1700061G19 gene, mousemouse

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
1700061G19RikQ08EE8 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
1700061G19RikQ08EE8 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
1700061G19RikQ08EE8 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
1700061G19RikQ08EE8 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
1700061G19RikQ08EE8 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
1700061G19RikQ08EE8 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
1700061G19RikQ08EE8 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
1700061G19RikQ08EE8 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
1700061G19RikQ08EE8 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC13.72□□□□□ -0.21
1700061G19RikQ08EE8 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
1700061G19RikQ08EE8 Gm14719-201ENSMUST00000121891 340 ntBASIC13.72□□□□□ -0.21
1700061G19RikQ08EE8 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC13.72□□□□□ -0.21
1700061G19RikQ08EE8 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC13.72□□□□□ -0.21
1700061G19RikQ08EE8 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC13.72□□□□□ -0.21
1700061G19RikQ08EE8 AC139580.1-202ENSMUST00000223574 928 ntBASIC13.72□□□□□ -0.21
1700061G19RikQ08EE8 Arhgef33-209ENSMUST00000225223 714 ntBASIC13.72□□□□□ -0.21
1700061G19RikQ08EE8 CT025535.1-201ENSMUST00000227172 491 ntBASIC13.72□□□□□ -0.21
1700061G19RikQ08EE8 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
1700061G19RikQ08EE8 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
1700061G19RikQ08EE8 Hist1h2al-201ENSMUST00000091708 339 ntBASIC13.72□□□□□ -0.21
1700061G19RikQ08EE8 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC13.72□□□□□ -0.21
1700061G19RikQ08EE8 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
1700061G19RikQ08EE8 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
1700061G19RikQ08EE8 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
1700061G19RikQ08EE8 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
1700061G19RikQ08EE8 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
1700061G19RikQ08EE8 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
1700061G19RikQ08EE8 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
1700061G19RikQ08EE8 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
1700061G19RikQ08EE8 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
1700061G19RikQ08EE8 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
1700061G19RikQ08EE8 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
1700061G19RikQ08EE8 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
1700061G19RikQ08EE8 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
1700061G19RikQ08EE8 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
1700061G19RikQ08EE8 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
1700061G19RikQ08EE8 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
1700061G19RikQ08EE8 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
1700061G19RikQ08EE8 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.72□□□□□ -0.21
1700061G19RikQ08EE8 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
1700061G19RikQ08EE8 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
1700061G19RikQ08EE8 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
1700061G19RikQ08EE8 Gm38037-201ENSMUST00000192600 1624 ntBASIC13.72□□□□□ -0.21
1700061G19RikQ08EE8 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
1700061G19RikQ08EE8 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
1700061G19RikQ08EE8 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
1700061G19RikQ08EE8 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
1700061G19RikQ08EE8 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
1700061G19RikQ08EE8 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
1700061G19RikQ08EE8 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
1700061G19RikQ08EE8 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
1700061G19RikQ08EE8 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
1700061G19RikQ08EE8 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
1700061G19RikQ08EE8 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
1700061G19RikQ08EE8 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
1700061G19RikQ08EE8 Gm12151-201ENSMUST00000121374 290 ntBASIC13.71□□□□□ -0.21
1700061G19RikQ08EE8 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC13.71□□□□□ -0.21
1700061G19RikQ08EE8 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC13.71□□□□□ -0.21
1700061G19RikQ08EE8 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
1700061G19RikQ08EE8 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC13.71□□□□□ -0.21
1700061G19RikQ08EE8 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.71□□□□□ -0.21
1700061G19RikQ08EE8 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
1700061G19RikQ08EE8 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
1700061G19RikQ08EE8 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
1700061G19RikQ08EE8 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
1700061G19RikQ08EE8 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
1700061G19RikQ08EE8 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
1700061G19RikQ08EE8 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
1700061G19RikQ08EE8 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
1700061G19RikQ08EE8 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
1700061G19RikQ08EE8 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
1700061G19RikQ08EE8 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
1700061G19RikQ08EE8 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
1700061G19RikQ08EE8 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
1700061G19RikQ08EE8 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
1700061G19RikQ08EE8 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
1700061G19RikQ08EE8 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
1700061G19RikQ08EE8 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
1700061G19RikQ08EE8 Gm6263-201ENSMUST00000120029 1342 ntBASIC13.7□□□□□ -0.22
1700061G19RikQ08EE8 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
1700061G19RikQ08EE8 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
1700061G19RikQ08EE8 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
1700061G19RikQ08EE8 Gm4782-201ENSMUST00000168705 2046 ntBASIC13.7□□□□□ -0.22
1700061G19RikQ08EE8 Gm28386-201ENSMUST00000189147 1849 ntBASIC13.7□□□□□ -0.22
1700061G19RikQ08EE8 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
1700061G19RikQ08EE8 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
1700061G19RikQ08EE8 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
1700061G19RikQ08EE8 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
1700061G19RikQ08EE8 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC13.7□□□□□ -0.22
1700061G19RikQ08EE8 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
1700061G19RikQ08EE8 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC13.7□□□□□ -0.22
1700061G19RikQ08EE8 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
1700061G19RikQ08EE8 Gm9797-201ENSMUST00000052902 613 ntBASIC13.7□□□□□ -0.22
1700061G19RikQ08EE8 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
1700061G19RikQ08EE8 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
1700061G19RikQ08EE8 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
1700061G19RikQ08EE8 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.7□□□□□ -0.22
1700061G19RikQ08EE8 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
1700061G19RikQ08EE8 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.7□□□□□ -0.22
1700061G19RikQ08EE8 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms