Protein–RNA interactions for Protein: Q06507

Atf4, Cyclic AMP-dependent transcription factor ATF-4, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf4Q06507 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Atf4Q06507 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Atf4Q06507 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Atf4Q06507 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Atf4Q06507 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Atf4Q06507 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Atf4Q06507 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Atf4Q06507 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
Atf4Q06507 Gm9200-201ENSMUST00000118513 1354 ntBASIC13.11□□□□□ -0.31
Atf4Q06507 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Atf4Q06507 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Atf4Q06507 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Atf4Q06507 Olfr1118-201ENSMUST00000121296 996 ntAPPRIS P2 BASIC13.11□□□□□ -0.31
Atf4Q06507 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC13.11□□□□□ -0.31
Atf4Q06507 Gm6098-201ENSMUST00000180234 330 ntBASIC13.11□□□□□ -0.31
Atf4Q06507 Gm10925-201ENSMUST00000189941 678 ntBASIC13.11□□□□□ -0.31
Atf4Q06507 Gm37684-201ENSMUST00000192779 355 ntBASIC13.11□□□□□ -0.31
Atf4Q06507 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC13.11□□□□□ -0.31
Atf4Q06507 Gm42588-201ENSMUST00000200538 1297 ntBASIC13.11□□□□□ -0.31
Atf4Q06507 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC13.11□□□□□ -0.31
Atf4Q06507 AC166349.1-201ENSMUST00000220866 695 ntBASIC13.11□□□□□ -0.31
Atf4Q06507 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Atf4Q06507 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Atf4Q06507 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Atf4Q06507 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Atf4Q06507 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Atf4Q06507 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Atf4Q06507 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Atf4Q06507 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Atf4Q06507 Gm12500-202ENSMUST00000186471 2428 ntBASIC13.11□□□□□ -0.31
Atf4Q06507 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Atf4Q06507 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Atf4Q06507 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Atf4Q06507 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Atf4Q06507 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Atf4Q06507 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Atf4Q06507 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Atf4Q06507 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Atf4Q06507 AC131068.2-201ENSMUST00000226175 1453 ntBASIC13.1□□□□□ -0.31
Atf4Q06507 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Atf4Q06507 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC13.1□□□□□ -0.31
Atf4Q06507 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC13.1□□□□□ -0.31
Atf4Q06507 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
Atf4Q06507 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Atf4Q06507 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Atf4Q06507 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Atf4Q06507 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Atf4Q06507 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Atf4Q06507 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Atf4Q06507 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.1□□□□□ -0.31
Atf4Q06507 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Atf4Q06507 Smgc-203ENSMUST00000109276 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Atf4Q06507 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Atf4Q06507 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Atf4Q06507 Mir1982-201ENSMUST00000157368 74 ntBASIC13.1□□□□□ -0.31
Atf4Q06507 Gm22764-201ENSMUST00000158370 92 ntBASIC13.1□□□□□ -0.31
Atf4Q06507 Gm16701-202ENSMUST00000180995 934 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Atf4Q06507 Celrr-201ENSMUST00000181183 1194 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Atf4Q06507 Gm5354-201ENSMUST00000182417 973 ntBASIC13.1□□□□□ -0.31
Atf4Q06507 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC13.1□□□□□ -0.31
Atf4Q06507 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC13.1□□□□□ -0.31
Atf4Q06507 Gm20822-202ENSMUST00000188422 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Atf4Q06507 Gm28911-201ENSMUST00000188837 117 ntBASIC13.1□□□□□ -0.31
Atf4Q06507 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Atf4Q06507 Gm20828-202ENSMUST00000190516 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Atf4Q06507 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Atf4Q06507 Gm18871-201ENSMUST00000218655 745 ntBASIC13.1□□□□□ -0.31
Atf4Q06507 AC173482.3-201ENSMUST00000225492 1212 ntBASIC13.1□□□□□ -0.31
Atf4Q06507 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Atf4Q06507 Olfr955-201ENSMUST00000073946 945 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Atf4Q06507 Gm22005-201ENSMUST00000082795 141 ntBASIC13.1□□□□□ -0.31
Atf4Q06507 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Atf4Q06507 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Atf4Q06507 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Atf4Q06507 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Atf4Q06507 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Atf4Q06507 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC13.1□□□□□ -0.31
Atf4Q06507 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Atf4Q06507 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC13.1□□□□□ -0.31
Atf4Q06507 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Atf4Q06507 AC158355.1-201ENSMUST00000215895 1705 ntBASIC13.1□□□□□ -0.31
Atf4Q06507 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Atf4Q06507 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Atf4Q06507 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Atf4Q06507 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Atf4Q06507 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Atf4Q06507 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Atf4Q06507 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Atf4Q06507 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Atf4Q06507 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Atf4Q06507 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Atf4Q06507 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Atf4Q06507 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Atf4Q06507 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Atf4Q06507 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Atf4Q06507 Gm4984-201ENSMUST00000115987 360 ntBASIC13.09□□□□□ -0.31
Atf4Q06507 Gm12742-201ENSMUST00000117326 410 ntBASIC13.09□□□□□ -0.31
Atf4Q06507 Gm8749-201ENSMUST00000117737 331 ntBASIC13.09□□□□□ -0.31
Atf4Q06507 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Atf4Q06507 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms