Protein–RNA interactions for Protein: Q01149

Col1a2, Collagen alpha-2(I) chain, mousemouse

Predictions only

Length 1,372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a2Q01149 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Col1a2Q01149 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC16.88■□□□□ 0.29
Col1a2Q01149 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col1a2Q01149 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col1a2Q01149 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Col1a2Q01149 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC16.88■□□□□ 0.29
Col1a2Q01149 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
Col1a2Q01149 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC16.88■□□□□ 0.29
Col1a2Q01149 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col1a2Q01149 Gm11637-201ENSMUST00000120601 592 ntBASIC16.88■□□□□ 0.29
Col1a2Q01149 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Col1a2Q01149 Gm6013-201ENSMUST00000212264 699 ntBASIC16.88■□□□□ 0.29
Col1a2Q01149 Gm45880-201ENSMUST00000213041 853 ntBASIC16.88■□□□□ 0.29
Col1a2Q01149 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Col1a2Q01149 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Col1a2Q01149 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col1a2Q01149 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col1a2Q01149 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Col1a2Q01149 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col1a2Q01149 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col1a2Q01149 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col1a2Q01149 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col1a2Q01149 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Col1a2Q01149 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col1a2Q01149 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col1a2Q01149 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Col1a2Q01149 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Col1a2Q01149 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Col1a2Q01149 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Col1a2Q01149 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC16.87■□□□□ 0.29
Col1a2Q01149 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col1a2Q01149 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col1a2Q01149 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Col1a2Q01149 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col1a2Q01149 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col1a2Q01149 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col1a2Q01149 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col1a2Q01149 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col1a2Q01149 Mir1247-201ENSMUST00000116706 82 ntBASIC16.87■□□□□ 0.29
Col1a2Q01149 Gm2231-201ENSMUST00000125661 612 ntBASIC16.87■□□□□ 0.29
Col1a2Q01149 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC16.87■□□□□ 0.29
Col1a2Q01149 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col1a2Q01149 Gm25261-201ENSMUST00000157416 134 ntBASIC16.87■□□□□ 0.29
Col1a2Q01149 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
Col1a2Q01149 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col1a2Q01149 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Col1a2Q01149 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC16.87■□□□□ 0.29
Col1a2Q01149 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC16.87■□□□□ 0.29
Col1a2Q01149 Gm37008-201ENSMUST00000195712 319 ntBASIC16.87■□□□□ 0.29
Col1a2Q01149 Gm43133-201ENSMUST00000197472 463 ntBASIC16.87■□□□□ 0.29
Col1a2Q01149 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Col1a2Q01149 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Col1a2Q01149 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC16.87■□□□□ 0.29
Col1a2Q01149 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC16.87■□□□□ 0.29
Col1a2Q01149 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Col1a2Q01149 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col1a2Q01149 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col1a2Q01149 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col1a2Q01149 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col1a2Q01149 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col1a2Q01149 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col1a2Q01149 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col1a2Q01149 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC16.86■□□□□ 0.29
Col1a2Q01149 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col1a2Q01149 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col1a2Q01149 Gm10729-202ENSMUST00000193403 1375 ntBASIC16.86■□□□□ 0.29
Col1a2Q01149 Gm38049-201ENSMUST00000195698 1372 ntBASIC16.86■□□□□ 0.29
Col1a2Q01149 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col1a2Q01149 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col1a2Q01149 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col1a2Q01149 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col1a2Q01149 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col1a2Q01149 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Col1a2Q01149 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col1a2Q01149 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC16.86■□□□□ 0.29
Col1a2Q01149 Gm8805-201ENSMUST00000117848 313 ntBASIC16.86■□□□□ 0.29
Col1a2Q01149 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC16.86■□□□□ 0.29
Col1a2Q01149 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Col1a2Q01149 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC16.86■□□□□ 0.29
Col1a2Q01149 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Col1a2Q01149 AC159896.2-201ENSMUST00000214753 269 ntBASIC16.86■□□□□ 0.29
Col1a2Q01149 AC154319.1-201ENSMUST00000216330 312 ntBASIC16.86■□□□□ 0.29
Col1a2Q01149 AL589735.1-201ENSMUST00000224353 270 ntBASIC16.86■□□□□ 0.29
Col1a2Q01149 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col1a2Q01149 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Col1a2Q01149 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Col1a2Q01149 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC16.86■□□□□ 0.29
Col1a2Q01149 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Col1a2Q01149 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col1a2Q01149 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Col1a2Q01149 Gm18222-201ENSMUST00000202416 1387 ntBASIC16.85■□□□□ 0.29
Col1a2Q01149 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Col1a2Q01149 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Col1a2Q01149 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col1a2Q01149 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Col1a2Q01149 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col1a2Q01149 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col1a2Q01149 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col1a2Q01149 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col1a2Q01149 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms