Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Lsm3P62311 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm3P62311 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm3P62311 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm3P62311 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm3P62311 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm3P62311 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm3P62311 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm3P62311 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.35□□□□□ -0.43
Lsm3P62311 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm3P62311 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.35□□□□□ -0.43
Lsm3P62311 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm3P62311 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm3P62311 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm3P62311 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm3P62311 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm3P62311 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Lsm3P62311 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm3P62311 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC12.35□□□□□ -0.43
Lsm3P62311 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC12.35□□□□□ -0.43
Lsm3P62311 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Lsm3P62311 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm3P62311 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm3P62311 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm3P62311 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm3P62311 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm3P62311 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm3P62311 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Lsm3P62311 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm3P62311 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm3P62311 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm3P62311 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm3P62311 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm3P62311 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm3P62311 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm3P62311 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm3P62311 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm3P62311 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm3P62311 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.35□□□□□ -0.43
Lsm3P62311 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm3P62311 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm3P62311 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.35□□□□□ -0.43
Lsm3P62311 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm3P62311 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm3P62311 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm3P62311 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm3P62311 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm3P62311 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm3P62311 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Lsm3P62311 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lsm3P62311 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Lsm3P62311 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lsm3P62311 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lsm3P62311 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Lsm3P62311 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lsm3P62311 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lsm3P62311 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.34□□□□□ -0.43
Lsm3P62311 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.34□□□□□ -0.43
Lsm3P62311 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lsm3P62311 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Lsm3P62311 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lsm3P62311 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lsm3P62311 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lsm3P62311 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lsm3P62311 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lsm3P62311 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC12.34□□□□□ -0.43
Lsm3P62311 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Lsm3P62311 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC12.34□□□□□ -0.43
Lsm3P62311 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Lsm3P62311 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Lsm3P62311 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC12.34□□□□□ -0.43
Lsm3P62311 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lsm3P62311 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lsm3P62311 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lsm3P62311 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lsm3P62311 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lsm3P62311 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lsm3P62311 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lsm3P62311 Gm13233-201ENSMUST00000118760 1443 ntBASIC12.34□□□□□ -0.43
Lsm3P62311 Gm13244-201ENSMUST00000118855 1446 ntBASIC12.34□□□□□ -0.43
Lsm3P62311 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lsm3P62311 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lsm3P62311 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lsm3P62311 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Lsm3P62311 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Lsm3P62311 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Lsm3P62311 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lsm3P62311 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Lsm3P62311 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Lsm3P62311 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.33□□□□□ -0.43
Lsm3P62311 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lsm3P62311 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lsm3P62311 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lsm3P62311 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lsm3P62311 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lsm3P62311 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Lsm3P62311 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Lsm3P62311 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
Lsm3P62311 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Lsm3P62311 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 70.8 ms