Protein–RNA interactions for Protein: P56857

Cldn18, Claudin-18, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn18P56857 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cldn18P56857 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cldn18P56857 H2-Pa-201ENSMUST00000182803 626 ntBASIC12.17□□□□□ -0.46
Cldn18P56857 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cldn18P56857 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cldn18P56857 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cldn18P56857 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cldn18P56857 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cldn18P56857 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC12.17□□□□□ -0.46
Cldn18P56857 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cldn18P56857 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Cldn18P56857 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cldn18P56857 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cldn18P56857 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cldn18P56857 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
Cldn18P56857 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cldn18P56857 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Cldn18P56857 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Cldn18P56857 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Cldn18P56857 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cldn18P56857 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cldn18P56857 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cldn18P56857 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
Cldn18P56857 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cldn18P56857 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cldn18P56857 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
Cldn18P56857 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cldn18P56857 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cldn18P56857 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cldn18P56857 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cldn18P56857 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cldn18P56857 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cldn18P56857 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC12.16□□□□□ -0.46
Cldn18P56857 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cldn18P56857 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cldn18P56857 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
Cldn18P56857 Gm15678-201ENSMUST00000117573 960 ntBASIC12.16□□□□□ -0.46
Cldn18P56857 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC12.16□□□□□ -0.46
Cldn18P56857 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC12.16□□□□□ -0.46
Cldn18P56857 Gm23984-201ENSMUST00000157139 203 ntBASIC12.16□□□□□ -0.46
Cldn18P56857 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC12.16□□□□□ -0.46
Cldn18P56857 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cldn18P56857 Gm6180-201ENSMUST00000065243 498 ntBASIC12.16□□□□□ -0.46
Cldn18P56857 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cldn18P56857 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cldn18P56857 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cldn18P56857 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cldn18P56857 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cldn18P56857 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cldn18P56857 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cldn18P56857 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cldn18P56857 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cldn18P56857 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cldn18P56857 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cldn18P56857 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC12.16□□□□□ -0.46
Cldn18P56857 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Cldn18P56857 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cldn18P56857 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cldn18P56857 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Cldn18P56857 Gm45779-201ENSMUST00000212189 4064 ntBASIC12.16□□□□□ -0.46
Cldn18P56857 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cldn18P56857 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cldn18P56857 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cldn18P56857 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cldn18P56857 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cldn18P56857 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cldn18P56857 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cldn18P56857 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cldn18P56857 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cldn18P56857 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cldn18P56857 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cldn18P56857 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cldn18P56857 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cldn18P56857 Ksr1-207ENSMUST00000226282 5260 ntBASIC12.15□□□□□ -0.46
Cldn18P56857 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cldn18P56857 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cldn18P56857 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cldn18P56857 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC12.15□□□□□ -0.46
Cldn18P56857 Gm12091-201ENSMUST00000146791 830 ntBASIC12.15□□□□□ -0.46
Cldn18P56857 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC12.15□□□□□ -0.46
Cldn18P56857 Gm8515-201ENSMUST00000194852 576 ntBASIC12.15□□□□□ -0.46
Cldn18P56857 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cldn18P56857 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC12.15□□□□□ -0.46
Cldn18P56857 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC12.15□□□□□ -0.46
Cldn18P56857 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
Cldn18P56857 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cldn18P56857 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cldn18P56857 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cldn18P56857 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cldn18P56857 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC12.15□□□□□ -0.46
Cldn18P56857 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cldn18P56857 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cldn18P56857 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cldn18P56857 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cldn18P56857 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cldn18P56857 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Cldn18P56857 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC12.15□□□□□ -0.46
Cldn18P56857 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Cldn18P56857 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Cldn18P56857 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms