Protein–RNA interactions for Protein: P49962

Srp9, Signal recognition particle 9 kDa protein, mousemouse

Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp9P49962 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Srp9P49962 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Srp9P49962 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Srp9P49962 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Srp9P49962 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Srp9P49962 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Srp9P49962 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC11.57□□□□□ -0.56
Srp9P49962 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC11.57□□□□□ -0.56
Srp9P49962 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Srp9P49962 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Srp9P49962 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Srp9P49962 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC11.57□□□□□ -0.56
Srp9P49962 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Srp9P49962 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Srp9P49962 Gm7002-201ENSMUST00000221386 2165 ntBASIC11.57□□□□□ -0.56
Srp9P49962 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Srp9P49962 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Srp9P49962 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Srp9P49962 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Srp9P49962 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Srp9P49962 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Srp9P49962 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC11.57□□□□□ -0.56
Srp9P49962 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Srp9P49962 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC11.57□□□□□ -0.56
Srp9P49962 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Srp9P49962 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC11.57□□□□□ -0.56
Srp9P49962 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC11.57□□□□□ -0.56
Srp9P49962 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC11.57□□□□□ -0.56
Srp9P49962 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Srp9P49962 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC11.57□□□□□ -0.56
Srp9P49962 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC11.57□□□□□ -0.56
Srp9P49962 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Srp9P49962 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Srp9P49962 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Srp9P49962 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Srp9P49962 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Srp9P49962 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Srp9P49962 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC11.57□□□□□ -0.56
Srp9P49962 Gm45638-201ENSMUST00000211507 2878 ntBASIC11.57□□□□□ -0.56
Srp9P49962 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Srp9P49962 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC11.57□□□□□ -0.56
Srp9P49962 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Srp9P49962 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Srp9P49962 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
Srp9P49962 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Srp9P49962 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Srp9P49962 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Srp9P49962 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Srp9P49962 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Srp9P49962 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Srp9P49962 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Srp9P49962 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Srp9P49962 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Srp9P49962 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Srp9P49962 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Srp9P49962 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC11.56□□□□□ -0.56
Srp9P49962 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Srp9P49962 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Srp9P49962 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Srp9P49962 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Srp9P49962 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Srp9P49962 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC11.56□□□□□ -0.56
Srp9P49962 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
Srp9P49962 Gm25925-201ENSMUST00000158314 306 ntBASIC11.56□□□□□ -0.56
Srp9P49962 Gm27702-201ENSMUST00000184512 56 ntBASIC11.56□□□□□ -0.56
Srp9P49962 Gm37935-201ENSMUST00000192012 982 ntBASIC11.56□□□□□ -0.56
Srp9P49962 AA619741-201ENSMUST00000195095 646 ntBASIC11.56□□□□□ -0.56
Srp9P49962 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC11.56□□□□□ -0.56
Srp9P49962 Gm43474-201ENSMUST00000196415 774 ntBASIC11.56□□□□□ -0.56
Srp9P49962 AC151286.1-201ENSMUST00000198489 145 ntBASIC11.56□□□□□ -0.56
Srp9P49962 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Srp9P49962 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Srp9P49962 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Srp9P49962 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Srp9P49962 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Srp9P49962 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Srp9P49962 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Srp9P49962 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Srp9P49962 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Srp9P49962 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Srp9P49962 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Srp9P49962 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC11.56□□□□□ -0.56
Srp9P49962 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Srp9P49962 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Srp9P49962 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Srp9P49962 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC11.55□□□□□ -0.56
Srp9P49962 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Srp9P49962 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Srp9P49962 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Srp9P49962 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Srp9P49962 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Srp9P49962 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Srp9P49962 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Srp9P49962 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Srp9P49962 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC11.55□□□□□ -0.56
Srp9P49962 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Srp9P49962 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Srp9P49962 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Srp9P49962 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Srp9P49962 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms