Protein–RNA interactions for Protein: P49698

Hnf4a, Hepatocyte nuclear factor 4-alpha, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hnf4aP49698 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hnf4aP49698 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hnf4aP49698 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Hnf4aP49698 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hnf4aP49698 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Hnf4aP49698 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hnf4aP49698 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Hnf4aP49698 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.18□□□□□ -0.3
Hnf4aP49698 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hnf4aP49698 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC13.18□□□□□ -0.3
Hnf4aP49698 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hnf4aP49698 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Hnf4aP49698 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.18□□□□□ -0.3
Hnf4aP49698 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hnf4aP49698 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hnf4aP49698 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hnf4aP49698 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hnf4aP49698 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hnf4aP49698 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hnf4aP49698 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC13.18□□□□□ -0.3
Hnf4aP49698 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC13.18□□□□□ -0.3
Hnf4aP49698 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC13.18□□□□□ -0.3
Hnf4aP49698 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC13.18□□□□□ -0.3
Hnf4aP49698 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hnf4aP49698 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hnf4aP49698 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hnf4aP49698 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC13.18□□□□□ -0.3
Hnf4aP49698 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hnf4aP49698 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.18□□□□□ -0.3
Hnf4aP49698 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hnf4aP49698 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hnf4aP49698 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hnf4aP49698 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hnf4aP49698 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hnf4aP49698 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
Hnf4aP49698 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hnf4aP49698 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hnf4aP49698 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hnf4aP49698 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hnf4aP49698 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.18□□□□□ -0.3
Hnf4aP49698 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hnf4aP49698 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
Hnf4aP49698 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hnf4aP49698 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Hnf4aP49698 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Hnf4aP49698 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Hnf4aP49698 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hnf4aP49698 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hnf4aP49698 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hnf4aP49698 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hnf4aP49698 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hnf4aP49698 Gm13859-201ENSMUST00000119936 1423 ntBASIC13.17□□□□□ -0.3
Hnf4aP49698 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hnf4aP49698 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
Hnf4aP49698 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC13.17□□□□□ -0.3
Hnf4aP49698 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC13.17□□□□□ -0.3
Hnf4aP49698 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC13.17□□□□□ -0.3
Hnf4aP49698 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC13.17□□□□□ -0.3
Hnf4aP49698 AC238811.1-201ENSMUST00000225302 441 ntBASIC13.17□□□□□ -0.3
Hnf4aP49698 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC13.17□□□□□ -0.3
Hnf4aP49698 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hnf4aP49698 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC13.17□□□□□ -0.3
Hnf4aP49698 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Hnf4aP49698 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hnf4aP49698 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hnf4aP49698 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hnf4aP49698 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Hnf4aP49698 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC13.17□□□□□ -0.3
Hnf4aP49698 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hnf4aP49698 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hnf4aP49698 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hnf4aP49698 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hnf4aP49698 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hnf4aP49698 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hnf4aP49698 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Hnf4aP49698 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.16□□□□□ -0.3
Hnf4aP49698 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Hnf4aP49698 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.16□□□□□ -0.3
Hnf4aP49698 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC13.16□□□□□ -0.3
Hnf4aP49698 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Hnf4aP49698 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC13.16□□□□□ -0.3
Hnf4aP49698 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hnf4aP49698 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hnf4aP49698 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hnf4aP49698 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hnf4aP49698 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hnf4aP49698 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hnf4aP49698 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Hnf4aP49698 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Hnf4aP49698 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Hnf4aP49698 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC13.16□□□□□ -0.3
Hnf4aP49698 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC13.16□□□□□ -0.3
Hnf4aP49698 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC13.16□□□□□ -0.3
Hnf4aP49698 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Hnf4aP49698 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Hnf4aP49698 Gm18905-201ENSMUST00000205454 928 ntBASIC13.16□□□□□ -0.3
Hnf4aP49698 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hnf4aP49698 AC154846.1-201ENSMUST00000226278 862 ntBASIC13.16□□□□□ -0.3
Hnf4aP49698 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hnf4aP49698 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 72.9 ms