Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Brca1P48754 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Brca1P48754 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Brca1P48754 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Brca1P48754 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Brca1P48754 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Brca1P48754 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.95□□□□□ -0.02
Brca1P48754 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Brca1P48754 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Brca1P48754 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Brca1P48754 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
Brca1P48754 Gm12208-201ENSMUST00000122004 163 ntBASIC14.95□□□□□ -0.02
Brca1P48754 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC14.95□□□□□ -0.02
Brca1P48754 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Brca1P48754 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Brca1P48754 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Brca1P48754 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC14.95□□□□□ -0.02
Brca1P48754 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC14.95□□□□□ -0.02
Brca1P48754 Gm44100-201ENSMUST00000204329 436 ntBASIC14.95□□□□□ -0.02
Brca1P48754 Gm8285-201ENSMUST00000208293 759 ntBASIC14.95□□□□□ -0.02
Brca1P48754 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC14.95□□□□□ -0.02
Brca1P48754 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Brca1P48754 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Brca1P48754 Gm5466-201ENSMUST00000119395 1890 ntBASIC14.95□□□□□ -0.02
Brca1P48754 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Brca1P48754 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Brca1P48754 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Brca1P48754 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Brca1P48754 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC14.95□□□□□ -0.02
Brca1P48754 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Brca1P48754 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Brca1P48754 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Brca1P48754 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Brca1P48754 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Brca1P48754 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.95□□□□□ -0.02
Brca1P48754 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC14.95□□□□□ -0.02
Brca1P48754 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Brca1P48754 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Brca1P48754 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Brca1P48754 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Brca1P48754 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Brca1P48754 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Brca1P48754 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Brca1P48754 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
Brca1P48754 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Brca1P48754 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Brca1P48754 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC14.94□□□□□ -0.02
Brca1P48754 Gm8856-201ENSMUST00000185254 1144 ntBASIC14.94□□□□□ -0.02
Brca1P48754 Gm3096-201ENSMUST00000185770 364 ntBASIC14.94□□□□□ -0.02
Brca1P48754 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC14.94□□□□□ -0.02
Brca1P48754 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC14.94□□□□□ -0.02
Brca1P48754 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Brca1P48754 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Brca1P48754 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Brca1P48754 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Brca1P48754 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC14.94□□□□□ -0.02
Brca1P48754 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Brca1P48754 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Brca1P48754 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.94□□□□□ -0.02
Brca1P48754 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Brca1P48754 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Brca1P48754 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Brca1P48754 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Brca1P48754 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Brca1P48754 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC14.94□□□□□ -0.02
Brca1P48754 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Brca1P48754 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC14.94□□□□□ -0.02
Brca1P48754 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC14.94□□□□□ -0.02
Brca1P48754 Gm44545-201ENSMUST00000208262 746 ntBASIC14.94□□□□□ -0.02
Brca1P48754 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC14.94□□□□□ -0.02
Brca1P48754 AC161537.1-201ENSMUST00000226199 1015 ntBASIC14.94□□□□□ -0.02
Brca1P48754 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Brca1P48754 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Brca1P48754 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Brca1P48754 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Brca1P48754 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Brca1P48754 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Brca1P48754 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Brca1P48754 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Brca1P48754 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Brca1P48754 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Brca1P48754 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Brca1P48754 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Brca1P48754 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
Brca1P48754 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Brca1P48754 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Brca1P48754 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC14.93□□□□□ -0.02
Brca1P48754 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
Brca1P48754 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Brca1P48754 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Brca1P48754 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Brca1P48754 Gm43273-201ENSMUST00000199649 2594 ntBASIC14.93□□□□□ -0.02
Brca1P48754 Gm12291-201ENSMUST00000121627 311 ntBASIC14.93□□□□□ -0.02
Brca1P48754 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Brca1P48754 Gm18734-201ENSMUST00000172937 808 ntBASIC14.93□□□□□ -0.02
Brca1P48754 Gm5597-201ENSMUST00000182353 1193 ntBASIC14.93□□□□□ -0.02
Brca1P48754 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC14.93□□□□□ -0.02
Brca1P48754 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC14.93□□□□□ -0.02
Brca1P48754 Gm19963-201ENSMUST00000208413 1255 ntBASIC14.93□□□□□ -0.02
Brca1P48754 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC14.93□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms