Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vps4bP46467 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Vps4bP46467 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Vps4bP46467 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vps4bP46467 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vps4bP46467 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vps4bP46467 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vps4bP46467 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Vps4bP46467 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Vps4bP46467 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Vps4bP46467 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Vps4bP46467 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vps4bP46467 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Vps4bP46467 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Vps4bP46467 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Vps4bP46467 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
Vps4bP46467 Gm24420-201ENSMUST00000176676 59 ntBASIC13.8□□□□□ -0.2
Vps4bP46467 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Vps4bP46467 Gm10766-202ENSMUST00000194123 606 ntBASIC13.8□□□□□ -0.2
Vps4bP46467 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Vps4bP46467 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Vps4bP46467 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vps4bP46467 AC159621.2-201ENSMUST00000223519 1326 ntBASIC13.8□□□□□ -0.2
Vps4bP46467 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vps4bP46467 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Vps4bP46467 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Vps4bP46467 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
Vps4bP46467 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.8□□□□□ -0.2
Vps4bP46467 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vps4bP46467 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vps4bP46467 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vps4bP46467 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Vps4bP46467 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC13.8□□□□□ -0.2
Vps4bP46467 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vps4bP46467 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vps4bP46467 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC13.79□□□□□ -0.2
Vps4bP46467 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Vps4bP46467 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vps4bP46467 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Vps4bP46467 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vps4bP46467 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Vps4bP46467 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vps4bP46467 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vps4bP46467 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Vps4bP46467 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Vps4bP46467 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Vps4bP46467 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vps4bP46467 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.79□□□□□ -0.2
Vps4bP46467 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vps4bP46467 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vps4bP46467 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vps4bP46467 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Vps4bP46467 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Vps4bP46467 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC13.79□□□□□ -0.2
Vps4bP46467 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC13.79□□□□□ -0.2
Vps4bP46467 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
Vps4bP46467 Gm5866-201ENSMUST00000177881 973 ntBASIC13.79□□□□□ -0.2
Vps4bP46467 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC13.79□□□□□ -0.2
Vps4bP46467 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC13.79□□□□□ -0.2
Vps4bP46467 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC13.79□□□□□ -0.2
Vps4bP46467 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC13.79□□□□□ -0.2
Vps4bP46467 AC131997.1-201ENSMUST00000228611 1229 ntBASIC13.79□□□□□ -0.2
Vps4bP46467 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Vps4bP46467 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Vps4bP46467 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Vps4bP46467 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Vps4bP46467 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vps4bP46467 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vps4bP46467 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vps4bP46467 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Vps4bP46467 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.79□□□□□ -0.2
Vps4bP46467 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Vps4bP46467 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vps4bP46467 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC13.79□□□□□ -0.2
Vps4bP46467 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC13.79□□□□□ -0.2
Vps4bP46467 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vps4bP46467 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Vps4bP46467 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vps4bP46467 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vps4bP46467 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vps4bP46467 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vps4bP46467 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vps4bP46467 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Vps4bP46467 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vps4bP46467 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vps4bP46467 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Vps4bP46467 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.78□□□□□ -0.2
Vps4bP46467 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vps4bP46467 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vps4bP46467 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vps4bP46467 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
Vps4bP46467 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vps4bP46467 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vps4bP46467 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vps4bP46467 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vps4bP46467 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vps4bP46467 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vps4bP46467 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Vps4bP46467 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vps4bP46467 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms