Protein–RNA interactions for Protein: P35278

Rab5c, Ras-related protein Rab-5C, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab5cP35278 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rab5cP35278 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC11.05□□□□□ -0.64
Rab5cP35278 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rab5cP35278 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Rab5cP35278 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Rab5cP35278 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Rab5cP35278 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Rab5cP35278 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rab5cP35278 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Rab5cP35278 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Rab5cP35278 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Rab5cP35278 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Rab5cP35278 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rab5cP35278 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rab5cP35278 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC11.04□□□□□ -0.64
Rab5cP35278 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rab5cP35278 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rab5cP35278 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rab5cP35278 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rab5cP35278 Rnf17-202ENSMUST00000223627 2077 ntBASIC11.04□□□□□ -0.64
Rab5cP35278 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rab5cP35278 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
Rab5cP35278 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
Rab5cP35278 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Rab5cP35278 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rab5cP35278 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Rab5cP35278 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Rab5cP35278 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC11.04□□□□□ -0.64
Rab5cP35278 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC11.04□□□□□ -0.64
Rab5cP35278 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC11.04□□□□□ -0.64
Rab5cP35278 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC11.04□□□□□ -0.64
Rab5cP35278 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rab5cP35278 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rab5cP35278 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC11.04□□□□□ -0.64
Rab5cP35278 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rab5cP35278 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rab5cP35278 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rab5cP35278 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rab5cP35278 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC11.04□□□□□ -0.64
Rab5cP35278 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.04□□□□□ -0.64
Rab5cP35278 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rab5cP35278 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Rab5cP35278 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rab5cP35278 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rab5cP35278 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC11.04□□□□□ -0.64
Rab5cP35278 AC137842.1-201ENSMUST00000227896 2064 ntBASIC11.04□□□□□ -0.64
Rab5cP35278 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rab5cP35278 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rab5cP35278 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Rab5cP35278 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Rab5cP35278 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rab5cP35278 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rab5cP35278 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rab5cP35278 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rab5cP35278 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rab5cP35278 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rab5cP35278 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rab5cP35278 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rab5cP35278 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rab5cP35278 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rab5cP35278 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rab5cP35278 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rab5cP35278 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rab5cP35278 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Rab5cP35278 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC11.03□□□□□ -0.64
Rab5cP35278 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Rab5cP35278 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rab5cP35278 Gm27742-201ENSMUST00000184667 60 ntBASIC11.03□□□□□ -0.64
Rab5cP35278 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC11.03□□□□□ -0.64
Rab5cP35278 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rab5cP35278 Gm2272-201ENSMUST00000194903 582 ntBASIC11.03□□□□□ -0.64
Rab5cP35278 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC11.03□□□□□ -0.64
Rab5cP35278 AC153889.1-201ENSMUST00000219257 330 ntBASIC11.03□□□□□ -0.64
Rab5cP35278 CT030704.2-201ENSMUST00000228887 494 ntBASIC11.03□□□□□ -0.64
Rab5cP35278 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Rab5cP35278 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rab5cP35278 Spr-ps1-201ENSMUST00000089584 605 ntBASIC11.03□□□□□ -0.64
Rab5cP35278 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Rab5cP35278 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rab5cP35278 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Rab5cP35278 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rab5cP35278 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rab5cP35278 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Rab5cP35278 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rab5cP35278 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Rab5cP35278 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rab5cP35278 Gm3928-201ENSMUST00000121141 1307 ntBASIC11.03□□□□□ -0.64
Rab5cP35278 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Rab5cP35278 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rab5cP35278 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rab5cP35278 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC11.03□□□□□ -0.64
Rab5cP35278 Gm45751-201ENSMUST00000210185 1573 ntBASIC11.03□□□□□ -0.64
Rab5cP35278 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC11.03□□□□□ -0.64
Rab5cP35278 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rab5cP35278 Best4-ps-201ENSMUST00000129783 1380 ntBASIC11.03□□□□□ -0.64
Rab5cP35278 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC11.03□□□□□ -0.64
Rab5cP35278 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Rab5cP35278 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Rab5cP35278 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Rab5cP35278 Gm4782-201ENSMUST00000168705 2046 ntBASIC11.02□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms