Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Gm15806-201ENSMUST00000120696 955 ntBASIC11.34□□□□□ -0.59
Col8a2P25318 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC11.34□□□□□ -0.59
Col8a2P25318 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC11.34□□□□□ -0.59
Col8a2P25318 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Col8a2P25318 Gm27839-201ENSMUST00000184242 106 ntBASIC11.34□□□□□ -0.59
Col8a2P25318 Gm27892-201ENSMUST00000185017 106 ntBASIC11.34□□□□□ -0.59
Col8a2P25318 Gm18187-201ENSMUST00000196476 984 ntBASIC11.34□□□□□ -0.59
Col8a2P25318 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC11.34□□□□□ -0.59
Col8a2P25318 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col8a2P25318 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col8a2P25318 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col8a2P25318 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Col8a2P25318 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col8a2P25318 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Col8a2P25318 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC11.34□□□□□ -0.59
Col8a2P25318 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
Col8a2P25318 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col8a2P25318 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col8a2P25318 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Col8a2P25318 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC11.34□□□□□ -0.59
Col8a2P25318 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Col8a2P25318 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC11.34□□□□□ -0.59
Col8a2P25318 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Col8a2P25318 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col8a2P25318 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Col8a2P25318 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Col8a2P25318 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC11.33□□□□□ -0.6
Col8a2P25318 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC11.33□□□□□ -0.6
Col8a2P25318 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col8a2P25318 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col8a2P25318 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Col8a2P25318 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col8a2P25318 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col8a2P25318 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col8a2P25318 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col8a2P25318 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col8a2P25318 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Col8a2P25318 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Col8a2P25318 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col8a2P25318 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col8a2P25318 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col8a2P25318 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col8a2P25318 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col8a2P25318 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col8a2P25318 Mir692-1-201ENSMUST00000102263 109 ntBASIC11.33□□□□□ -0.6
Col8a2P25318 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col8a2P25318 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC11.33□□□□□ -0.6
Col8a2P25318 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC11.33□□□□□ -0.6
Col8a2P25318 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Col8a2P25318 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC11.33□□□□□ -0.6
Col8a2P25318 Gm27772-201ENSMUST00000184900 187 ntBASIC11.33□□□□□ -0.6
Col8a2P25318 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Col8a2P25318 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC11.33□□□□□ -0.6
Col8a2P25318 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Col8a2P25318 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Col8a2P25318 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col8a2P25318 Gm5161-201ENSMUST00000075243 853 ntBASIC11.33□□□□□ -0.6
Col8a2P25318 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col8a2P25318 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col8a2P25318 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col8a2P25318 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col8a2P25318 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col8a2P25318 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Col8a2P25318 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col8a2P25318 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col8a2P25318 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col8a2P25318 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Col8a2P25318 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Col8a2P25318 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
Col8a2P25318 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Col8a2P25318 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col8a2P25318 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col8a2P25318 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col8a2P25318 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC11.32□□□□□ -0.6
Col8a2P25318 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Col8a2P25318 Gm2420-202ENSMUST00000202224 2249 ntBASIC11.32□□□□□ -0.6
Col8a2P25318 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col8a2P25318 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col8a2P25318 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC11.32□□□□□ -0.6
Col8a2P25318 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col8a2P25318 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col8a2P25318 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Col8a2P25318 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col8a2P25318 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Col8a2P25318 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col8a2P25318 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Col8a2P25318 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Col8a2P25318 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC11.32□□□□□ -0.6
Col8a2P25318 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col8a2P25318 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC11.32□□□□□ -0.6
Col8a2P25318 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Col8a2P25318 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC11.32□□□□□ -0.6
Col8a2P25318 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col8a2P25318 Mir7085-201ENSMUST00000184353 66 ntBASIC11.32□□□□□ -0.6
Col8a2P25318 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC11.32□□□□□ -0.6
Col8a2P25318 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Col8a2P25318 AC073947.2-201ENSMUST00000215888 1130 ntBASIC11.32□□□□□ -0.6
Col8a2P25318 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Col8a2P25318 Gm17870-201ENSMUST00000219489 1174 ntBASIC11.32□□□□□ -0.6
Col8a2P25318 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms