Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC12.1□□□□□ -0.47
P20040 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.1□□□□□ -0.47
P20040 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
P20040 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
P20040 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
P20040 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
P20040 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
P20040 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
P20040 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
P20040 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
P20040 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
P20040 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
P20040 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
P20040 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
P20040 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
P20040 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC12.1□□□□□ -0.47
P20040 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
P20040 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
P20040 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
P20040 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC12.1□□□□□ -0.47
P20040 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC12.1□□□□□ -0.47
P20040 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
P20040 Gm27306-201ENSMUST00000183970 107 ntBASIC12.1□□□□□ -0.47
P20040 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC12.1□□□□□ -0.47
P20040 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
P20040 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
P20040 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
P20040 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
P20040 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
P20040 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
P20040 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
P20040 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
P20040 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
P20040 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
P20040 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
P20040 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.1□□□□□ -0.47
P20040 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
P20040 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.1□□□□□ -0.47
P20040 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
P20040 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
P20040 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
P20040 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
P20040 AC124751.1-201ENSMUST00000222716 1408 ntBASIC12.1□□□□□ -0.47
P20040 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
P20040 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
P20040 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
P20040 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC12.1□□□□□ -0.47
P20040 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
P20040 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
P20040 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
P20040 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
P20040 Gm45751-201ENSMUST00000210185 1573 ntBASIC12.09□□□□□ -0.47
P20040 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P20040 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
P20040 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P20040 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
P20040 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
P20040 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
P20040 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
P20040 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P20040 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
P20040 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P20040 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P20040 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P20040 Mir1897-201ENSMUST00000122581 272 ntBASIC12.09□□□□□ -0.47
P20040 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
P20040 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
P20040 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
P20040 Shd-206ENSMUST00000225145 998 ntBASIC12.09□□□□□ -0.47
P20040 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P20040 Gm5763-201ENSMUST00000155951 1530 ntBASIC12.09□□□□□ -0.47
P20040 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.09□□□□□ -0.47
P20040 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P20040 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
P20040 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
P20040 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P20040 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P20040 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
P20040 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
P20040 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
P20040 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
P20040 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
P20040 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
P20040 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
P20040 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
P20040 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
P20040 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
P20040 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.08□□□□□ -0.48
P20040 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.08□□□□□ -0.48
P20040 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
P20040 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
P20040 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
P20040 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
P20040 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
P20040 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
P20040 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC12.08□□□□□ -0.48
P20040 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
P20040 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
P20040 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
P20040 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms