Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Hoxc6P10629 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC15.01□□□□□ -0.01
Hoxc6P10629 Gm38000-201ENSMUST00000192390 1215 ntBASIC15.01□□□□□ -0.01
Hoxc6P10629 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Hoxc6P10629 AC134335.2-201ENSMUST00000227660 440 ntBASIC15.01□□□□□ -0.01
Hoxc6P10629 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hoxc6P10629 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hoxc6P10629 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Hoxc6P10629 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Hoxc6P10629 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Hoxc6P10629 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Hoxc6P10629 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hoxc6P10629 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hoxc6P10629 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hoxc6P10629 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hoxc6P10629 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hoxc6P10629 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Hoxc6P10629 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC15.01□□□□□ -0.01
Hoxc6P10629 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Hoxc6P10629 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC15□□□□□ -0.01
Hoxc6P10629 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC15□□□□□ -0.01
Hoxc6P10629 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Hoxc6P10629 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Hoxc6P10629 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Hoxc6P10629 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Hoxc6P10629 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Hoxc6P10629 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC15□□□□□ -0.01
Hoxc6P10629 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Hoxc6P10629 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC15□□□□□ -0.01
Hoxc6P10629 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC15□□□□□ -0.01
Hoxc6P10629 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC15□□□□□ -0.01
Hoxc6P10629 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC15□□□□□ -0.01
Hoxc6P10629 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC15□□□□□ -0.01
Hoxc6P10629 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC15□□□□□ -0.01
Hoxc6P10629 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Hoxc6P10629 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Hoxc6P10629 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Hoxc6P10629 Gm6621-201ENSMUST00000193251 772 ntBASIC15□□□□□ -0.01
Hoxc6P10629 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC15□□□□□ -0.01
Hoxc6P10629 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Hoxc6P10629 Gm10608-202ENSMUST00000213924 676 ntBASIC15□□□□□ -0.01
Hoxc6P10629 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC15□□□□□ -0.01
Hoxc6P10629 AC134254.1-201ENSMUST00000221362 167 ntBASIC15□□□□□ -0.01
Hoxc6P10629 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Hoxc6P10629 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Hoxc6P10629 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Hoxc6P10629 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Hoxc6P10629 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Hoxc6P10629 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Hoxc6P10629 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Hoxc6P10629 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC15□□□□□ -0.01
Hoxc6P10629 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Hoxc6P10629 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Hoxc6P10629 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Hoxc6P10629 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Hoxc6P10629 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Hoxc6P10629 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Hoxc6P10629 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC15□□□□□ -0.01
Hoxc6P10629 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
Hoxc6P10629 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Hoxc6P10629 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Hoxc6P10629 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Hoxc6P10629 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Hoxc6P10629 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Hoxc6P10629 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Hoxc6P10629 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Hoxc6P10629 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Hoxc6P10629 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Hoxc6P10629 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Hoxc6P10629 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Hoxc6P10629 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Hoxc6P10629 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Hoxc6P10629 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC14.99□□□□□ -0.01
Hoxc6P10629 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Hoxc6P10629 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Hoxc6P10629 Gm18244-201ENSMUST00000219747 1566 ntBASIC14.99□□□□□ -0.01
Hoxc6P10629 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Hoxc6P10629 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Hoxc6P10629 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC14.99□□□□□ -0.01
Hoxc6P10629 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Hoxc6P10629 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Hoxc6P10629 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Hoxc6P10629 Gm11637-201ENSMUST00000120601 592 ntBASIC14.99□□□□□ -0.01
Hoxc6P10629 Gm11658-201ENSMUST00000120913 1008 ntBASIC14.99□□□□□ -0.01
Hoxc6P10629 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Hoxc6P10629 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC14.99□□□□□ -0.01
Hoxc6P10629 Gm2467-201ENSMUST00000182266 1010 ntBASIC14.99□□□□□ -0.01
Hoxc6P10629 Gm6981-201ENSMUST00000182467 1008 ntBASIC14.99□□□□□ -0.01
Hoxc6P10629 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Hoxc6P10629 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Hoxc6P10629 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Hoxc6P10629 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Hoxc6P10629 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Hoxc6P10629 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Hoxc6P10629 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Hoxc6P10629 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Hoxc6P10629 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Hoxc6P10629 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Hoxc6P10629 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Hoxc6P10629 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms