Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.72
Ccl1P10146 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Ccl1P10146 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ccl1P10146 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC10.52□□□□□ -0.73
Ccl1P10146 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ccl1P10146 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ccl1P10146 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ccl1P10146 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ccl1P10146 Gm42480-201ENSMUST00000198434 2595 ntBASIC10.52□□□□□ -0.73
Ccl1P10146 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Ccl1P10146 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ccl1P10146 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ccl1P10146 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Ccl1P10146 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Ccl1P10146 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ccl1P10146 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC10.52□□□□□ -0.73
Ccl1P10146 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC10.52□□□□□ -0.73
Ccl1P10146 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Ccl1P10146 Klk2-ps-201ENSMUST00000205342 571 ntBASIC10.52□□□□□ -0.73
Ccl1P10146 Gm44608-201ENSMUST00000206827 855 ntBASIC10.52□□□□□ -0.73
Ccl1P10146 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Ccl1P10146 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC10.52□□□□□ -0.73
Ccl1P10146 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Ccl1P10146 Gm10176-201ENSMUST00000159707 2264 ntBASIC10.52□□□□□ -0.73
Ccl1P10146 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Ccl1P10146 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ccl1P10146 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Ccl1P10146 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Ccl1P10146 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Ccl1P10146 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Ccl1P10146 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ccl1P10146 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ccl1P10146 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Ccl1P10146 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ccl1P10146 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC10.52□□□□□ -0.73
Ccl1P10146 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC10.52□□□□□ -0.73
Ccl1P10146 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Ccl1P10146 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ccl1P10146 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ccl1P10146 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ccl1P10146 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ccl1P10146 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Ccl1P10146 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC10.51□□□□□ -0.73
Ccl1P10146 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC10.51□□□□□ -0.73
Ccl1P10146 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ccl1P10146 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC10.51□□□□□ -0.73
Ccl1P10146 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ccl1P10146 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ccl1P10146 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ccl1P10146 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ccl1P10146 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ccl1P10146 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Ccl1P10146 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ccl1P10146 CT025626.1-201ENSMUST00000223735 1455 ntBASIC10.51□□□□□ -0.73
Ccl1P10146 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC10.51□□□□□ -0.73
Ccl1P10146 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Ccl1P10146 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ccl1P10146 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC10.51□□□□□ -0.73
Ccl1P10146 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ccl1P10146 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ccl1P10146 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ccl1P10146 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC10.51□□□□□ -0.73
Ccl1P10146 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC10.51□□□□□ -0.73
Ccl1P10146 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC10.51□□□□□ -0.73
Ccl1P10146 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Ccl1P10146 Gm14859-201ENSMUST00000117752 357 ntBASIC10.51□□□□□ -0.73
Ccl1P10146 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC10.51□□□□□ -0.73
Ccl1P10146 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC10.51□□□□□ -0.73
Ccl1P10146 Gm33142-201ENSMUST00000193913 867 ntBASIC10.51□□□□□ -0.73
Ccl1P10146 AC131709.1-201ENSMUST00000224731 1180 ntBASIC10.51□□□□□ -0.73
Ccl1P10146 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ccl1P10146 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC10.51□□□□□ -0.73
Ccl1P10146 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ccl1P10146 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Ccl1P10146 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Ccl1P10146 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Ccl1P10146 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Ccl1P10146 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ccl1P10146 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ccl1P10146 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ccl1P10146 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ccl1P10146 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ccl1P10146 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ccl1P10146 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ccl1P10146 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ccl1P10146 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ccl1P10146 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ccl1P10146 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ccl1P10146 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ccl1P10146 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Ccl1P10146 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC10.5□□□□□ -0.73
Ccl1P10146 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ccl1P10146 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ccl1P10146 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ccl1P10146 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ccl1P10146 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Ccl1P10146 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Ccl1P10146 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ccl1P10146 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Ccl1P10146 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms