Protein–RNA interactions for Protein: P04940

Ig kappa chain V-VI region NQ2-17.4.1, mousemouse

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04940 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.65
P04940 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
P04940 Gm38144-201ENSMUST00000192790 465 ntBASIC11.02□□□□□ -0.65
P04940 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
P04940 AC155258.1-201ENSMUST00000219303 253 ntBASIC11.02□□□□□ -0.65
P04940 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
P04940 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC11.02□□□□□ -0.65
P04940 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
P04940 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC11.02□□□□□ -0.65
P04940 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC11.02□□□□□ -0.65
P04940 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC11.02□□□□□ -0.65
P04940 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC11.02□□□□□ -0.65
P04940 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
P04940 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
P04940 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
P04940 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
P04940 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
P04940 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
P04940 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
P04940 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
P04940 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
P04940 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
P04940 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
P04940 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
P04940 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
P04940 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
P04940 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
P04940 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
P04940 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
P04940 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
P04940 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
P04940 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
P04940 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
P04940 Acot6-202ENSMUST00000222921 3622 ntBASIC11.01□□□□□ -0.65
P04940 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
P04940 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
P04940 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC11.01□□□□□ -0.65
P04940 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
P04940 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
P04940 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
P04940 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC11.01□□□□□ -0.65
P04940 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC11.01□□□□□ -0.65
P04940 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC11.01□□□□□ -0.65
P04940 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC11.01□□□□□ -0.65
P04940 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
P04940 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
P04940 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC11.01□□□□□ -0.65
P04940 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
P04940 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.65
P04940 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
P04940 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC11.01□□□□□ -0.65
P04940 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC11.01□□□□□ -0.65
P04940 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
P04940 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
P04940 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
P04940 Gm37795-201ENSMUST00000194216 2459 ntBASIC11.01□□□□□ -0.65
P04940 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC11.01□□□□□ -0.65
P04940 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC11.01□□□□□ -0.65
P04940 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
P04940 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
P04940 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
P04940 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
P04940 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
P04940 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
P04940 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
P04940 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
P04940 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
P04940 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
P04940 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
P04940 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
P04940 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
P04940 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
P04940 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
P04940 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
P04940 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
P04940 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
P04940 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
P04940 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC11□□□□□ -0.65
P04940 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
P04940 Gm43134-201ENSMUST00000199434 1886 ntBASIC11□□□□□ -0.65
P04940 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
P04940 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
P04940 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC11□□□□□ -0.65
P04940 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
P04940 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
P04940 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC11□□□□□ -0.65
P04940 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC11□□□□□ -0.65
P04940 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
P04940 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
P04940 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC11□□□□□ -0.65
P04940 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
P04940 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
P04940 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC11□□□□□ -0.65
P04940 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC11□□□□□ -0.65
P04940 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC11□□□□□ -0.65
P04940 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC11□□□□□ -0.65
P04940 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
P04940 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC11□□□□□ -0.65
P04940 Gm42612-201ENSMUST00000197986 623 ntBASIC11□□□□□ -0.65
P04940 Gm43170-201ENSMUST00000199827 612 ntBASIC11□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms