Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Igh-VJ558P01758 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Igh-VJ558P01758 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Igh-VJ558P01758 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Igh-VJ558P01758 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Igh-VJ558P01758 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Igh-VJ558P01758 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Igh-VJ558P01758 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Igh-VJ558P01758 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Igh-VJ558P01758 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Igh-VJ558P01758 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC11.75□□□□□ -0.53
Igh-VJ558P01758 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC11.75□□□□□ -0.53
Igh-VJ558P01758 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Igh-VJ558P01758 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Igh-VJ558P01758 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Igh-VJ558P01758 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Igh-VJ558P01758 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Igh-VJ558P01758 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Igh-VJ558P01758 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Igh-VJ558P01758 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Igh-VJ558P01758 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
Igh-VJ558P01758 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Igh-VJ558P01758 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Igh-VJ558P01758 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Igh-VJ558P01758 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC11.75□□□□□ -0.53
Igh-VJ558P01758 Gm43094-201ENSMUST00000196549 921 ntBASIC11.75□□□□□ -0.53
Igh-VJ558P01758 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Igh-VJ558P01758 Gm5161-201ENSMUST00000075243 853 ntBASIC11.75□□□□□ -0.53
Igh-VJ558P01758 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Igh-VJ558P01758 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Igh-VJ558P01758 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Igh-VJ558P01758 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Igh-VJ558P01758 Gm45779-201ENSMUST00000212189 4064 ntBASIC11.75□□□□□ -0.53
Igh-VJ558P01758 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Igh-VJ558P01758 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Igh-VJ558P01758 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
Igh-VJ558P01758 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Igh-VJ558P01758 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Igh-VJ558P01758 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Igh-VJ558P01758 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Igh-VJ558P01758 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Igh-VJ558P01758 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Igh-VJ558P01758 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Igh-VJ558P01758 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Igh-VJ558P01758 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Igh-VJ558P01758 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Igh-VJ558P01758 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Igh-VJ558P01758 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Igh-VJ558P01758 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Igh-VJ558P01758 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Igh-VJ558P01758 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Igh-VJ558P01758 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Igh-VJ558P01758 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC11.74□□□□□ -0.53
Igh-VJ558P01758 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC11.74□□□□□ -0.53
Igh-VJ558P01758 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Igh-VJ558P01758 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Igh-VJ558P01758 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Igh-VJ558P01758 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC11.74□□□□□ -0.53
Igh-VJ558P01758 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC11.74□□□□□ -0.53
Igh-VJ558P01758 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC11.74□□□□□ -0.53
Igh-VJ558P01758 Wdyhv1-203ENSMUST00000226889 394 ntBASIC11.74□□□□□ -0.53
Igh-VJ558P01758 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Igh-VJ558P01758 Syt7-204ENSMUST00000223586 1344 ntBASIC11.74□□□□□ -0.53
Igh-VJ558P01758 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Igh-VJ558P01758 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Igh-VJ558P01758 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Igh-VJ558P01758 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Igh-VJ558P01758 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC11.74□□□□□ -0.53
Igh-VJ558P01758 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC11.74□□□□□ -0.53
Igh-VJ558P01758 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC11.74□□□□□ -0.53
Igh-VJ558P01758 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Igh-VJ558P01758 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Igh-VJ558P01758 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Igh-VJ558P01758 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
Igh-VJ558P01758 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Igh-VJ558P01758 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Igh-VJ558P01758 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Igh-VJ558P01758 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Igh-VJ558P01758 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Igh-VJ558P01758 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Igh-VJ558P01758 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Igh-VJ558P01758 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Igh-VJ558P01758 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Igh-VJ558P01758 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Igh-VJ558P01758 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Igh-VJ558P01758 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Igh-VJ558P01758 Gm38094-201ENSMUST00000195864 2978 ntBASIC11.73□□□□□ -0.53
Igh-VJ558P01758 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Igh-VJ558P01758 Gm42928-201ENSMUST00000197338 3339 ntBASIC11.73□□□□□ -0.53
Igh-VJ558P01758 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Igh-VJ558P01758 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC11.73□□□□□ -0.53
Igh-VJ558P01758 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Igh-VJ558P01758 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Igh-VJ558P01758 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Igh-VJ558P01758 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Igh-VJ558P01758 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Igh-VJ558P01758 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC11.73□□□□□ -0.53
Igh-VJ558P01758 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Igh-VJ558P01758 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Igh-VJ558P01758 Gm12485-201ENSMUST00000119641 291 ntBASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms