Protein–RNA interactions for Protein: P01643

Ig kappa chain V-V region MOPC 173, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01643 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC10.78□□□□□ -0.68
P01643 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
P01643 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P01643 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
P01643 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P01643 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC10.78□□□□□ -0.68
P01643 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
P01643 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC10.78□□□□□ -0.68
P01643 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
P01643 Gm45784-201ENSMUST00000188360 142 ntBASIC10.78□□□□□ -0.68
P01643 Gm42442-201ENSMUST00000197951 1133 ntBASIC10.78□□□□□ -0.68
P01643 Gm9299-201ENSMUST00000206392 1140 ntBASIC10.78□□□□□ -0.68
P01643 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC10.78□□□□□ -0.68
P01643 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC10.78□□□□□ -0.68
P01643 Itm2b-204ENSMUST00000228637 783 ntBASIC10.78□□□□□ -0.68
P01643 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
P01643 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P01643 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P01643 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P01643 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
P01643 Rn7sk-201ENSMUST00000083103 331 ntBASIC10.78□□□□□ -0.68
P01643 Gm26315-201ENSMUST00000083890 321 ntBASIC10.78□□□□□ -0.68
P01643 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P01643 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P01643 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P01643 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P01643 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
P01643 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
P01643 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
P01643 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P01643 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
P01643 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC10.78□□□□□ -0.68
P01643 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC10.78□□□□□ -0.68
P01643 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
P01643 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
P01643 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P01643 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
P01643 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
P01643 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
P01643 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
P01643 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
P01643 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC10.77□□□□□ -0.68
P01643 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
P01643 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
P01643 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
P01643 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC10.77□□□□□ -0.68
P01643 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
P01643 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
P01643 Gm15889-202ENSMUST00000212669 2443 ntBASIC10.77□□□□□ -0.68
P01643 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
P01643 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
P01643 Gm26513-201ENSMUST00000181802 2489 ntBASIC10.77□□□□□ -0.69
P01643 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
P01643 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC10.77□□□□□ -0.69
P01643 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
P01643 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
P01643 AC131068.2-201ENSMUST00000226175 1453 ntBASIC10.77□□□□□ -0.69
P01643 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
P01643 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC10.77□□□□□ -0.69
P01643 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC10.77□□□□□ -0.69
P01643 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
P01643 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
P01643 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
P01643 Gm12742-201ENSMUST00000117326 410 ntBASIC10.77□□□□□ -0.69
P01643 Gm11803-201ENSMUST00000119966 444 ntBASIC10.77□□□□□ -0.69
P01643 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC10.77□□□□□ -0.69
P01643 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
P01643 Gm24644-201ENSMUST00000157114 139 ntBASIC10.77□□□□□ -0.69
P01643 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC10.77□□□□□ -0.69
P01643 Gm27731-201ENSMUST00000185192 107 ntBASIC10.77□□□□□ -0.69
P01643 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
P01643 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
P01643 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC10.77□□□□□ -0.69
P01643 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
P01643 Gm9899-201ENSMUST00000065519 555 ntBASIC10.77□□□□□ -0.69
P01643 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
P01643 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
P01643 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
P01643 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
P01643 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
P01643 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
P01643 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
P01643 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
P01643 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
P01643 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
P01643 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
P01643 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
P01643 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
P01643 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC10.77□□□□□ -0.69
P01643 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
P01643 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
P01643 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
P01643 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
P01643 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
P01643 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.76□□□□□ -0.69
P01643 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
P01643 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
P01643 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
P01643 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC10.76□□□□□ -0.69
P01643 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms