Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
ClppO88696 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ClppO88696 Gm14452-201ENSMUST00000118680 1632 ntBASIC13.33□□□□□ -0.28
ClppO88696 Gm11918-201ENSMUST00000121660 179 ntBASIC13.33□□□□□ -0.28
ClppO88696 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC13.33□□□□□ -0.28
ClppO88696 Gm9002-201ENSMUST00000178437 499 ntBASIC13.33□□□□□ -0.28
ClppO88696 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC13.33□□□□□ -0.28
ClppO88696 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC13.33□□□□□ -0.28
ClppO88696 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC13.33□□□□□ -0.28
ClppO88696 AC132467.2-202ENSMUST00000227726 559 ntBASIC13.33□□□□□ -0.28
ClppO88696 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ClppO88696 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC13.33□□□□□ -0.28
ClppO88696 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
ClppO88696 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ClppO88696 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
ClppO88696 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ClppO88696 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
ClppO88696 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
ClppO88696 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ClppO88696 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ClppO88696 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC13.33□□□□□ -0.28
ClppO88696 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ClppO88696 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC13.33□□□□□ -0.28
ClppO88696 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ClppO88696 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ClppO88696 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC13.32□□□□□ -0.28
ClppO88696 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC13.32□□□□□ -0.28
ClppO88696 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ClppO88696 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ClppO88696 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
ClppO88696 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
ClppO88696 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ClppO88696 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
ClppO88696 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
ClppO88696 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ClppO88696 Gm15806-201ENSMUST00000120696 955 ntBASIC13.32□□□□□ -0.28
ClppO88696 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ClppO88696 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC13.32□□□□□ -0.28
ClppO88696 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ClppO88696 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ClppO88696 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC13.32□□□□□ -0.28
ClppO88696 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ClppO88696 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
ClppO88696 Gm5279-201ENSMUST00000199575 745 ntBASIC13.32□□□□□ -0.28
ClppO88696 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC13.32□□□□□ -0.28
ClppO88696 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC13.32□□□□□ -0.28
ClppO88696 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ClppO88696 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
ClppO88696 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ClppO88696 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ClppO88696 Gm14451-201ENSMUST00000121581 1542 ntBASIC13.32□□□□□ -0.28
ClppO88696 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ClppO88696 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
ClppO88696 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ClppO88696 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
ClppO88696 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC13.32□□□□□ -0.28
ClppO88696 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ClppO88696 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ClppO88696 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ClppO88696 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
ClppO88696 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
ClppO88696 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC13.32□□□□□ -0.28
ClppO88696 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ClppO88696 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
ClppO88696 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ClppO88696 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
ClppO88696 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
ClppO88696 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ClppO88696 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
ClppO88696 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ClppO88696 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
ClppO88696 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
ClppO88696 Gm37014-201ENSMUST00000194723 2253 ntBASIC13.31□□□□□ -0.28
ClppO88696 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC13.31□□□□□ -0.28
ClppO88696 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.31□□□□□ -0.28
ClppO88696 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ClppO88696 Gm6912-201ENSMUST00000117218 544 ntBASIC13.31□□□□□ -0.28
ClppO88696 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC13.31□□□□□ -0.28
ClppO88696 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
ClppO88696 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.31□□□□□ -0.28
ClppO88696 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ClppO88696 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC13.31□□□□□ -0.28
ClppO88696 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ClppO88696 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ClppO88696 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC13.31□□□□□ -0.28
ClppO88696 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ClppO88696 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC13.31□□□□□ -0.28
ClppO88696 AC139350.3-201ENSMUST00000226151 420 ntBASIC13.31□□□□□ -0.28
ClppO88696 AC102291.3-201ENSMUST00000226566 405 ntBASIC13.31□□□□□ -0.28
ClppO88696 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ClppO88696 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
ClppO88696 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ClppO88696 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ClppO88696 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ClppO88696 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
ClppO88696 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ClppO88696 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
ClppO88696 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
ClppO88696 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ClppO88696 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms