Protein–RNA interactions for Protein: O70477

Pknox1, Homeobox protein PKNOX1, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pknox1O70477 Gm10327-201ENSMUST00000105222 1002 ntBASIC13.52□□□□□ -0.25
Pknox1O70477 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pknox1O70477 Gm11557-201ENSMUST00000120200 1008 ntBASIC13.52□□□□□ -0.25
Pknox1O70477 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
Pknox1O70477 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Pknox1O70477 Gm6736-201ENSMUST00000166583 948 ntBASIC13.52□□□□□ -0.25
Pknox1O70477 Gm8927-201ENSMUST00000181978 981 ntBASIC13.52□□□□□ -0.25
Pknox1O70477 Gm27702-201ENSMUST00000184512 56 ntBASIC13.52□□□□□ -0.25
Pknox1O70477 Gm5069-202ENSMUST00000192714 1011 ntBASIC13.52□□□□□ -0.25
Pknox1O70477 Gm5425-201ENSMUST00000214125 459 ntBASIC13.52□□□□□ -0.25
Pknox1O70477 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Pknox1O70477 Gm3222-201ENSMUST00000071282 990 ntBASIC13.52□□□□□ -0.25
Pknox1O70477 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pknox1O70477 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Pknox1O70477 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pknox1O70477 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Pknox1O70477 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pknox1O70477 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pknox1O70477 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Pknox1O70477 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Pknox1O70477 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Pknox1O70477 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.52□□□□□ -0.25
Pknox1O70477 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Pknox1O70477 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pknox1O70477 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC13.52□□□□□ -0.25
Pknox1O70477 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pknox1O70477 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pknox1O70477 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pknox1O70477 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pknox1O70477 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Pknox1O70477 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pknox1O70477 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pknox1O70477 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pknox1O70477 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pknox1O70477 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pknox1O70477 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
Pknox1O70477 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pknox1O70477 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pknox1O70477 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pknox1O70477 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pknox1O70477 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pknox1O70477 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC13.51□□□□□ -0.25
Pknox1O70477 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pknox1O70477 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pknox1O70477 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pknox1O70477 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pknox1O70477 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pknox1O70477 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pknox1O70477 Gm13385-201ENSMUST00000121089 220 ntBASIC13.51□□□□□ -0.25
Pknox1O70477 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC13.51□□□□□ -0.25
Pknox1O70477 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC13.51□□□□□ -0.25
Pknox1O70477 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC13.51□□□□□ -0.25
Pknox1O70477 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC13.51□□□□□ -0.25
Pknox1O70477 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pknox1O70477 Gm27430-201ENSMUST00000184585 107 ntBASIC13.51□□□□□ -0.25
Pknox1O70477 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC13.51□□□□□ -0.25
Pknox1O70477 Gm44333-201ENSMUST00000197168 107 ntBASIC13.51□□□□□ -0.25
Pknox1O70477 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC13.51□□□□□ -0.25
Pknox1O70477 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pknox1O70477 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pknox1O70477 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pknox1O70477 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pknox1O70477 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pknox1O70477 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pknox1O70477 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pknox1O70477 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pknox1O70477 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
Pknox1O70477 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
Pknox1O70477 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pknox1O70477 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pknox1O70477 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pknox1O70477 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Pknox1O70477 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pknox1O70477 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pknox1O70477 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pknox1O70477 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pknox1O70477 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Pknox1O70477 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pknox1O70477 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pknox1O70477 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pknox1O70477 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pknox1O70477 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Pknox1O70477 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Pknox1O70477 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pknox1O70477 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pknox1O70477 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pknox1O70477 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pknox1O70477 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC13.5□□□□□ -0.25
Pknox1O70477 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pknox1O70477 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pknox1O70477 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pknox1O70477 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pknox1O70477 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC13.5□□□□□ -0.25
Pknox1O70477 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Pknox1O70477 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
Pknox1O70477 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC13.5□□□□□ -0.25
Pknox1O70477 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pknox1O70477 Gm10766-202ENSMUST00000194123 606 ntBASIC13.5□□□□□ -0.25
Pknox1O70477 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pknox1O70477 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 158.5 ms