Protein–RNA interactions for Protein: O54908

Dkk1, Dickkopf-related protein 1, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dkk1O54908 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC12.48□□□□□ -0.41
Dkk1O54908 Gm5655-201ENSMUST00000221078 901 ntBASIC12.48□□□□□ -0.41
Dkk1O54908 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Dkk1O54908 AC158529.1-201ENSMUST00000223618 239 ntBASIC12.48□□□□□ -0.41
Dkk1O54908 Rpl22l1-201ENSMUST00000043867 552 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Dkk1O54908 Gm6812-201ENSMUST00000074894 525 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Dkk1O54908 1700020N15Rik-201ENSMUST00000075654 525 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Dkk1O54908 Olfr787-201ENSMUST00000077836 939 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Dkk1O54908 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Dkk1O54908 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Dkk1O54908 Spink13-201ENSMUST00000097557 796 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Dkk1O54908 Gm4778-201ENSMUST00000098878 1098 ntBASIC12.48□□□□□ -0.41
Dkk1O54908 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Dkk1O54908 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Dkk1O54908 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Dkk1O54908 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Dkk1O54908 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Dkk1O54908 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC12.48□□□□□ -0.41
Dkk1O54908 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Dkk1O54908 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Dkk1O54908 Gm45605-201ENSMUST00000210265 4269 ntBASIC12.48□□□□□ -0.41
Dkk1O54908 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Dkk1O54908 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Dkk1O54908 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Dkk1O54908 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Dkk1O54908 1110015O18Rik-202ENSMUST00000183944 1533 ntTSL 3 BASIC12.47□□□□□ -0.41
Dkk1O54908 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Dkk1O54908 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Dkk1O54908 Gm45504-201ENSMUST00000211407 2107 ntBASIC12.47□□□□□ -0.41
Dkk1O54908 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Dkk1O54908 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Dkk1O54908 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Dkk1O54908 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Dkk1O54908 Olfr1188-202ENSMUST00000217131 1406 ntAPPRIS ALT2 TSL 3 BASIC12.47□□□□□ -0.41
Dkk1O54908 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Dkk1O54908 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Dkk1O54908 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Dkk1O54908 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Dkk1O54908 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC12.47□□□□□ -0.41
Dkk1O54908 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Dkk1O54908 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Dkk1O54908 Gm11990-201ENSMUST00000121505 897 ntBASIC12.47□□□□□ -0.41
Dkk1O54908 Mup-ps22-201ENSMUST00000121611 243 ntBASIC12.47□□□□□ -0.41
Dkk1O54908 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Dkk1O54908 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Dkk1O54908 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Dkk1O54908 Gm23228-201ENSMUST00000157296 270 ntBASIC12.47□□□□□ -0.41
Dkk1O54908 Gm22818-201ENSMUST00000157446 104 ntBASIC12.47□□□□□ -0.41
Dkk1O54908 Gm15734-201ENSMUST00000163076 1040 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Dkk1O54908 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC12.47□□□□□ -0.41
Dkk1O54908 Vmn1r-ps60-201ENSMUST00000173467 852 ntBASIC12.47□□□□□ -0.41
Dkk1O54908 Vmn1r14-201ENSMUST00000177435 912 ntAPPRIS P2 BASIC12.47□□□□□ -0.41
Dkk1O54908 2900009J06Rik-201ENSMUST00000185310 498 ntTSL 2 BASIC12.47□□□□□ -0.41
Dkk1O54908 Gm28387-201ENSMUST00000189245 854 ntTSL 3 BASIC12.47□□□□□ -0.41
Dkk1O54908 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC12.47□□□□□ -0.41
Dkk1O54908 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC12.47□□□□□ -0.41
Dkk1O54908 Gm44733-201ENSMUST00000208067 543 ntTSL 3 BASIC12.47□□□□□ -0.41
Dkk1O54908 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Dkk1O54908 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Dkk1O54908 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC12.47□□□□□ -0.41
Dkk1O54908 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Dkk1O54908 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC12.47□□□□□ -0.41
Dkk1O54908 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Dkk1O54908 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Dkk1O54908 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
Dkk1O54908 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Dkk1O54908 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Dkk1O54908 Gm6756-201ENSMUST00000180647 1620 ntBASIC12.47□□□□□ -0.41
Dkk1O54908 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Dkk1O54908 Gm44441-201ENSMUST00000203642 2475 ntBASIC12.47□□□□□ -0.41
Dkk1O54908 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Dkk1O54908 Mageb18-201ENSMUST00000088137 1571 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Dkk1O54908 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
Dkk1O54908 AC130823.1-201ENSMUST00000228929 1549 ntBASIC12.47□□□□□ -0.41
Dkk1O54908 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Dkk1O54908 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Dkk1O54908 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Dkk1O54908 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Dkk1O54908 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Dkk1O54908 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Dkk1O54908 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Dkk1O54908 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Dkk1O54908 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Dkk1O54908 Gm29340-201ENSMUST00000188763 3854 ntBASIC12.46□□□□□ -0.41
Dkk1O54908 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Dkk1O54908 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Dkk1O54908 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Dkk1O54908 AC117608.2-201ENSMUST00000224124 1363 ntBASIC12.46□□□□□ -0.41
Dkk1O54908 Gm19967-201ENSMUST00000179676 2138 ntTSL 5 BASIC12.46□□□□□ -0.41
Dkk1O54908 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Dkk1O54908 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Dkk1O54908 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Dkk1O54908 Gm7869-201ENSMUST00000121457 1322 ntBASIC12.46□□□□□ -0.41
Dkk1O54908 Kcne3-203ENSMUST00000178946 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Dkk1O54908 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Dkk1O54908 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Dkk1O54908 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Dkk1O54908 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Dkk1O54908 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Dkk1O54908 Klra10-201ENSMUST00000112020 823 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms