Protein–RNA interactions for Protein: E9Q0F0

Krt78, Keratin 78, mousemouse

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt78E9Q0F0 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Krt78E9Q0F0 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Krt78E9Q0F0 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Krt78E9Q0F0 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Krt78E9Q0F0 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Krt78E9Q0F0 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC15.16■□□□□ 0.02
Krt78E9Q0F0 Gm12485-201ENSMUST00000119641 291 ntBASIC15.16■□□□□ 0.02
Krt78E9Q0F0 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Krt78E9Q0F0 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC15.16■□□□□ 0.02
Krt78E9Q0F0 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Krt78E9Q0F0 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Krt78E9Q0F0 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Krt78E9Q0F0 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Krt78E9Q0F0 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
Krt78E9Q0F0 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
Krt78E9Q0F0 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC15.16■□□□□ 0.02
Krt78E9Q0F0 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Krt78E9Q0F0 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Krt78E9Q0F0 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Krt78E9Q0F0 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Krt78E9Q0F0 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Krt78E9Q0F0 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Krt78E9Q0F0 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC15.16■□□□□ 0.02
Krt78E9Q0F0 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Krt78E9Q0F0 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Krt78E9Q0F0 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Krt78E9Q0F0 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Krt78E9Q0F0 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Krt78E9Q0F0 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Krt78E9Q0F0 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Krt78E9Q0F0 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Krt78E9Q0F0 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Krt78E9Q0F0 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Krt78E9Q0F0 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Krt78E9Q0F0 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Krt78E9Q0F0 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Krt78E9Q0F0 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Krt78E9Q0F0 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Krt78E9Q0F0 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Krt78E9Q0F0 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
Krt78E9Q0F0 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Krt78E9Q0F0 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Krt78E9Q0F0 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Krt78E9Q0F0 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Krt78E9Q0F0 Gm10327-201ENSMUST00000105222 1002 ntBASIC15.15■□□□□ 0.02
Krt78E9Q0F0 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Krt78E9Q0F0 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC15.15■□□□□ 0.02
Krt78E9Q0F0 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Krt78E9Q0F0 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC15.15■□□□□ 0.02
Krt78E9Q0F0 Gm5069-202ENSMUST00000192714 1011 ntBASIC15.15■□□□□ 0.02
Krt78E9Q0F0 Gm19078-201ENSMUST00000206311 727 ntBASIC15.15■□□□□ 0.02
Krt78E9Q0F0 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Krt78E9Q0F0 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC15.15■□□□□ 0.02
Krt78E9Q0F0 Gm2423-201ENSMUST00000074863 733 ntBASIC15.15■□□□□ 0.02
Krt78E9Q0F0 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC15.15■□□□□ 0.02
Krt78E9Q0F0 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC15.15■□□□□ 0.02
Krt78E9Q0F0 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Krt78E9Q0F0 Ntrk2-209ENSMUST00000225950 2640 ntBASIC15.15■□□□□ 0.02
Krt78E9Q0F0 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Krt78E9Q0F0 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC15.15■□□□□ 0.02
Krt78E9Q0F0 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Krt78E9Q0F0 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Krt78E9Q0F0 Gm8775-201ENSMUST00000170943 1327 ntBASIC15.15■□□□□ 0.02
Krt78E9Q0F0 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Krt78E9Q0F0 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Krt78E9Q0F0 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Krt78E9Q0F0 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Krt78E9Q0F0 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Krt78E9Q0F0 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC15.14■□□□□ 0.01
Krt78E9Q0F0 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Krt78E9Q0F0 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Krt78E9Q0F0 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Krt78E9Q0F0 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Krt78E9Q0F0 Gm12537-201ENSMUST00000119266 1002 ntBASIC15.14■□□□□ 0.01
Krt78E9Q0F0 Gm12070-201ENSMUST00000119551 1002 ntBASIC15.14■□□□□ 0.01
Krt78E9Q0F0 Gm12671-201ENSMUST00000119978 1002 ntBASIC15.14■□□□□ 0.01
Krt78E9Q0F0 Gm13292-201ENSMUST00000120014 1000 ntBASIC15.14■□□□□ 0.01
Krt78E9Q0F0 Gm12403-201ENSMUST00000121384 959 ntBASIC15.14■□□□□ 0.01
Krt78E9Q0F0 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC15.14■□□□□ 0.01
Krt78E9Q0F0 Gm26464-201ENSMUST00000157094 305 ntBASIC15.14■□□□□ 0.01
Krt78E9Q0F0 Gm10359-201ENSMUST00000180167 1002 ntBASIC15.14■□□□□ 0.01
Krt78E9Q0F0 Gm12033-201ENSMUST00000180654 1002 ntBASIC15.14■□□□□ 0.01
Krt78E9Q0F0 Gm5559-201ENSMUST00000180755 1002 ntBASIC15.14■□□□□ 0.01
Krt78E9Q0F0 Gm4335-201ENSMUST00000182581 1004 ntBASIC15.14■□□□□ 0.01
Krt78E9Q0F0 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC15.14■□□□□ 0.01
Krt78E9Q0F0 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC15.14■□□□□ 0.01
Krt78E9Q0F0 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC15.14■□□□□ 0.01
Krt78E9Q0F0 Gm17330-201ENSMUST00000221047 165 ntBASIC15.14■□□□□ 0.01
Krt78E9Q0F0 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Krt78E9Q0F0 Gm24447-201ENSMUST00000083977 338 ntBASIC15.14■□□□□ 0.01
Krt78E9Q0F0 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Krt78E9Q0F0 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Krt78E9Q0F0 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC15.14■□□□□ 0.01
Krt78E9Q0F0 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Krt78E9Q0F0 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Krt78E9Q0F0 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Krt78E9Q0F0 Syt7-205ENSMUST00000224135 1557 ntBASIC15.14■□□□□ 0.01
Krt78E9Q0F0 Gm38197-201ENSMUST00000192320 2122 ntBASIC15.14■□□□□ 0.01
Krt78E9Q0F0 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Krt78E9Q0F0 Gm7899-201ENSMUST00000192935 1897 ntBASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms