Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc194A0A140LIT1 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc194A0A140LIT1 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc194A0A140LIT1 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Ccdc194A0A140LIT1 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc194A0A140LIT1 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC13.54□□□□□ -0.24
Ccdc194A0A140LIT1 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc194A0A140LIT1 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc194A0A140LIT1 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc194A0A140LIT1 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc194A0A140LIT1 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Ccdc194A0A140LIT1 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc194A0A140LIT1 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.54□□□□□ -0.24
Ccdc194A0A140LIT1 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc194A0A140LIT1 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc194A0A140LIT1 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc194A0A140LIT1 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc194A0A140LIT1 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ccdc194A0A140LIT1 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc194A0A140LIT1 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.53□□□□□ -0.24
Ccdc194A0A140LIT1 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc194A0A140LIT1 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.53□□□□□ -0.24
Ccdc194A0A140LIT1 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc194A0A140LIT1 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc194A0A140LIT1 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Ccdc194A0A140LIT1 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc194A0A140LIT1 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc194A0A140LIT1 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc194A0A140LIT1 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc194A0A140LIT1 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Ccdc194A0A140LIT1 Gm7336-201ENSMUST00000107041 1232 ntBASIC13.53□□□□□ -0.24
Ccdc194A0A140LIT1 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc194A0A140LIT1 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
Ccdc194A0A140LIT1 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc194A0A140LIT1 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC13.53□□□□□ -0.24
Ccdc194A0A140LIT1 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC13.53□□□□□ -0.24
Ccdc194A0A140LIT1 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Ccdc194A0A140LIT1 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC13.53□□□□□ -0.24
Ccdc194A0A140LIT1 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.53□□□□□ -0.24
Ccdc194A0A140LIT1 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC13.53□□□□□ -0.24
Ccdc194A0A140LIT1 Gm18934-201ENSMUST00000216671 1044 ntBASIC13.53□□□□□ -0.24
Ccdc194A0A140LIT1 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC13.53□□□□□ -0.24
Ccdc194A0A140LIT1 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Ccdc194A0A140LIT1 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc194A0A140LIT1 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc194A0A140LIT1 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc194A0A140LIT1 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
Ccdc194A0A140LIT1 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc194A0A140LIT1 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc194A0A140LIT1 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc194A0A140LIT1 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ccdc194A0A140LIT1 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.52□□□□□ -0.24
Ccdc194A0A140LIT1 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ccdc194A0A140LIT1 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ccdc194A0A140LIT1 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ccdc194A0A140LIT1 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13.52□□□□□ -0.24
Ccdc194A0A140LIT1 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc194A0A140LIT1 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Ccdc194A0A140LIT1 Gm10327-201ENSMUST00000105222 1002 ntBASIC13.52□□□□□ -0.25
Ccdc194A0A140LIT1 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc194A0A140LIT1 Gm13385-201ENSMUST00000121089 220 ntBASIC13.52□□□□□ -0.25
Ccdc194A0A140LIT1 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Ccdc194A0A140LIT1 Gm26308-201ENSMUST00000157768 69 ntBASIC13.52□□□□□ -0.25
Ccdc194A0A140LIT1 Gm5069-202ENSMUST00000192714 1011 ntBASIC13.52□□□□□ -0.25
Ccdc194A0A140LIT1 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC13.52□□□□□ -0.25
Ccdc194A0A140LIT1 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc194A0A140LIT1 Gm8396-201ENSMUST00000057361 823 ntBASIC13.52□□□□□ -0.25
Ccdc194A0A140LIT1 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Ccdc194A0A140LIT1 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc194A0A140LIT1 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc194A0A140LIT1 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Ccdc194A0A140LIT1 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC13.52□□□□□ -0.25
Ccdc194A0A140LIT1 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc194A0A140LIT1 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Ccdc194A0A140LIT1 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc194A0A140LIT1 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc194A0A140LIT1 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC13.52□□□□□ -0.25
Ccdc194A0A140LIT1 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ccdc194A0A140LIT1 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc194A0A140LIT1 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc194A0A140LIT1 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc194A0A140LIT1 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc194A0A140LIT1 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc194A0A140LIT1 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc194A0A140LIT1 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc194A0A140LIT1 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.51□□□□□ -0.25
Ccdc194A0A140LIT1 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Ccdc194A0A140LIT1 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc194A0A140LIT1 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
Ccdc194A0A140LIT1 AC164107.1-201ENSMUST00000227730 2161 ntBASIC13.51□□□□□ -0.25
Ccdc194A0A140LIT1 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc194A0A140LIT1 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc194A0A140LIT1 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc194A0A140LIT1 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc194A0A140LIT1 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc194A0A140LIT1 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc194A0A140LIT1 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC13.51□□□□□ -0.25
Ccdc194A0A140LIT1 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc194A0A140LIT1 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ccdc194A0A140LIT1 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms