Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav8-1A0A075B641 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav8-1A0A075B641 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC9.73□□□□□ -0.85
Trav8-1A0A075B641 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Trav8-1A0A075B641 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Trav8-1A0A075B641 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav8-1A0A075B641 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Trav8-1A0A075B641 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC9.73□□□□□ -0.85
Trav8-1A0A075B641 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav8-1A0A075B641 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav8-1A0A075B641 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav8-1A0A075B641 Gm43423-201ENSMUST00000198390 2094 ntBASIC9.73□□□□□ -0.85
Trav8-1A0A075B641 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav8-1A0A075B641 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC9.73□□□□□ -0.85
Trav8-1A0A075B641 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav8-1A0A075B641 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav8-1A0A075B641 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Trav8-1A0A075B641 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav8-1A0A075B641 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Trav8-1A0A075B641 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav8-1A0A075B641 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Trav8-1A0A075B641 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav8-1A0A075B641 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav8-1A0A075B641 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav8-1A0A075B641 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav8-1A0A075B641 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav8-1A0A075B641 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
Trav8-1A0A075B641 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav8-1A0A075B641 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav8-1A0A075B641 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav8-1A0A075B641 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Trav8-1A0A075B641 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav8-1A0A075B641 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Trav8-1A0A075B641 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Trav8-1A0A075B641 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav8-1A0A075B641 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav8-1A0A075B641 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav8-1A0A075B641 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav8-1A0A075B641 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Trav8-1A0A075B641 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC9.72□□□□□ -0.85
Trav8-1A0A075B641 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Trav8-1A0A075B641 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC9.72□□□□□ -0.85
Trav8-1A0A075B641 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC9.72□□□□□ -0.85
Trav8-1A0A075B641 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC9.72□□□□□ -0.85
Trav8-1A0A075B641 Gm9682-201ENSMUST00000197505 556 ntBASIC9.72□□□□□ -0.85
Trav8-1A0A075B641 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC9.72□□□□□ -0.85
Trav8-1A0A075B641 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav8-1A0A075B641 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav8-1A0A075B641 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav8-1A0A075B641 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
Trav8-1A0A075B641 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav8-1A0A075B641 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Trav8-1A0A075B641 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Trav8-1A0A075B641 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav8-1A0A075B641 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC9.72□□□□□ -0.85
Trav8-1A0A075B641 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav8-1A0A075B641 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav8-1A0A075B641 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav8-1A0A075B641 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Trav8-1A0A075B641 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Trav8-1A0A075B641 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC9.72□□□□□ -0.85
Trav8-1A0A075B641 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC9.72□□□□□ -0.85
Trav8-1A0A075B641 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC9.72□□□□□ -0.85
Trav8-1A0A075B641 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Trav8-1A0A075B641 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav8-1A0A075B641 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Trav8-1A0A075B641 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav8-1A0A075B641 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav8-1A0A075B641 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav8-1A0A075B641 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Trav8-1A0A075B641 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Trav8-1A0A075B641 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Trav8-1A0A075B641 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Trav8-1A0A075B641 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.85
Trav8-1A0A075B641 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.85
Trav8-1A0A075B641 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Trav8-1A0A075B641 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Trav8-1A0A075B641 AC116503.1-201ENSMUST00000215445 2192 ntBASIC9.71□□□□□ -0.85
Trav8-1A0A075B641 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC9.71□□□□□ -0.85
Trav8-1A0A075B641 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.85
Trav8-1A0A075B641 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Trav8-1A0A075B641 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Trav8-1A0A075B641 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Trav8-1A0A075B641 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Trav8-1A0A075B641 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Trav8-1A0A075B641 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC9.71□□□□□ -0.86
Trav8-1A0A075B641 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
Trav8-1A0A075B641 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trav8-1A0A075B641 Mir7071-201ENSMUST00000184847 69 ntBASIC9.71□□□□□ -0.86
Trav8-1A0A075B641 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC9.71□□□□□ -0.86
Trav8-1A0A075B641 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC9.71□□□□□ -0.86
Trav8-1A0A075B641 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trav8-1A0A075B641 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trav8-1A0A075B641 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC9.71□□□□□ -0.86
Trav8-1A0A075B641 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trav8-1A0A075B641 AC115735.4-201ENSMUST00000227460 1944 ntBASIC9.71□□□□□ -0.86
Trav8-1A0A075B641 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.86
Trav8-1A0A075B641 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Trav8-1A0A075B641 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC9.71□□□□□ -0.86
Trav8-1A0A075B641 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms