Protein–RNA interactions for Protein: Q9R1R0

Lhx6, LIM/homeobox protein Lhx6, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx6Q9R1R0 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Lhx6Q9R1R0 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC13.17□□□□□ -0.3
Lhx6Q9R1R0 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lhx6Q9R1R0 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC13.17□□□□□ -0.3
Lhx6Q9R1R0 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lhx6Q9R1R0 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lhx6Q9R1R0 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lhx6Q9R1R0 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lhx6Q9R1R0 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Lhx6Q9R1R0 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lhx6Q9R1R0 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lhx6Q9R1R0 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Lhx6Q9R1R0 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lhx6Q9R1R0 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lhx6Q9R1R0 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Lhx6Q9R1R0 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lhx6Q9R1R0 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lhx6Q9R1R0 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lhx6Q9R1R0 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lhx6Q9R1R0 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lhx6Q9R1R0 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Lhx6Q9R1R0 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lhx6Q9R1R0 Gm37648-201ENSMUST00000192072 2563 ntBASIC13.16□□□□□ -0.3
Lhx6Q9R1R0 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lhx6Q9R1R0 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lhx6Q9R1R0 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lhx6Q9R1R0 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Lhx6Q9R1R0 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lhx6Q9R1R0 Gm14723-201ENSMUST00000118686 215 ntBASIC13.16□□□□□ -0.3
Lhx6Q9R1R0 Gm14746-201ENSMUST00000120309 741 ntBASIC13.16□□□□□ -0.3
Lhx6Q9R1R0 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC13.16□□□□□ -0.3
Lhx6Q9R1R0 4933438A12Rik-201ENSMUST00000144579 1013 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Lhx6Q9R1R0 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
Lhx6Q9R1R0 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lhx6Q9R1R0 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC13.16□□□□□ -0.3
Lhx6Q9R1R0 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lhx6Q9R1R0 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC13.16□□□□□ -0.3
Lhx6Q9R1R0 Gm40646-201ENSMUST00000218243 490 ntTSL 5 BASIC13.16□□□□□ -0.3
Lhx6Q9R1R0 Gm34662-202ENSMUST00000220753 603 ntTSL 5 BASIC13.16□□□□□ -0.3
Lhx6Q9R1R0 Gm8607-201ENSMUST00000221864 431 ntBASIC13.16□□□□□ -0.3
Lhx6Q9R1R0 AC155252.1-201ENSMUST00000226462 1208 ntBASIC13.16□□□□□ -0.3
Lhx6Q9R1R0 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lhx6Q9R1R0 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lhx6Q9R1R0 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lhx6Q9R1R0 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lhx6Q9R1R0 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Lhx6Q9R1R0 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
Lhx6Q9R1R0 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lhx6Q9R1R0 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Lhx6Q9R1R0 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Lhx6Q9R1R0 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lhx6Q9R1R0 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lhx6Q9R1R0 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Lhx6Q9R1R0 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lhx6Q9R1R0 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lhx6Q9R1R0 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lhx6Q9R1R0 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lhx6Q9R1R0 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lhx6Q9R1R0 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lhx6Q9R1R0 AC164565.1-201ENSMUST00000217520 1484 ntBASIC13.16□□□□□ -0.3
Lhx6Q9R1R0 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lhx6Q9R1R0 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lhx6Q9R1R0 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lhx6Q9R1R0 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Lhx6Q9R1R0 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lhx6Q9R1R0 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Lhx6Q9R1R0 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13.15□□□□□ -0.3
Lhx6Q9R1R0 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lhx6Q9R1R0 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lhx6Q9R1R0 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Lhx6Q9R1R0 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lhx6Q9R1R0 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
Lhx6Q9R1R0 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lhx6Q9R1R0 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lhx6Q9R1R0 Ctdspl2-203ENSMUST00000110574 1616 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
Lhx6Q9R1R0 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC13.15□□□□□ -0.3
Lhx6Q9R1R0 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lhx6Q9R1R0 Rhox3f-201ENSMUST00000115172 833 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lhx6Q9R1R0 Gm13678-201ENSMUST00000118926 340 ntBASIC13.15□□□□□ -0.3
Lhx6Q9R1R0 Rhox3g-201ENSMUST00000119965 991 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Lhx6Q9R1R0 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC13.15□□□□□ -0.3
Lhx6Q9R1R0 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC13.15□□□□□ -0.3
Lhx6Q9R1R0 1700003H04Rik-203ENSMUST00000178485 761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lhx6Q9R1R0 Tcstv1-201ENSMUST00000178510 1280 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Lhx6Q9R1R0 Rhox3f-203ENSMUST00000184451 1008 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Lhx6Q9R1R0 Gm27486-201ENSMUST00000184923 80 ntBASIC13.15□□□□□ -0.3
Lhx6Q9R1R0 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Lhx6Q9R1R0 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lhx6Q9R1R0 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lhx6Q9R1R0 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lhx6Q9R1R0 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lhx6Q9R1R0 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC13.15□□□□□ -0.3
Lhx6Q9R1R0 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Lhx6Q9R1R0 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lhx6Q9R1R0 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lhx6Q9R1R0 Efs-202ENSMUST00000227037 2540 ntBASIC13.15□□□□□ -0.3
Lhx6Q9R1R0 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lhx6Q9R1R0 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lhx6Q9R1R0 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Lhx6Q9R1R0 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms