Protein–RNA interactions for Protein: Q9JIS7

Cacna1f, Voltage-dependent L-type calcium channel subunit alpha-1F, mousemouse

Predictions only

Length 1,985 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1fQ9JIS7 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cacna1fQ9JIS7 Gm22042-201ENSMUST00000082989 165 ntBASIC15.23■□□□□ 0.03
Cacna1fQ9JIS7 Gm26232-201ENSMUST00000083360 166 ntBASIC15.23■□□□□ 0.03
Cacna1fQ9JIS7 Gm24136-201ENSMUST00000083374 165 ntBASIC15.23■□□□□ 0.03
Cacna1fQ9JIS7 Rnu1b6-201ENSMUST00000083839 166 ntBASIC15.23■□□□□ 0.03
Cacna1fQ9JIS7 Gm26110-201ENSMUST00000083971 165 ntBASIC15.23■□□□□ 0.03
Cacna1fQ9JIS7 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cacna1fQ9JIS7 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cacna1fQ9JIS7 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cacna1fQ9JIS7 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cacna1fQ9JIS7 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cacna1fQ9JIS7 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cacna1fQ9JIS7 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cacna1fQ9JIS7 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cacna1fQ9JIS7 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Cacna1fQ9JIS7 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cacna1fQ9JIS7 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cacna1fQ9JIS7 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cacna1fQ9JIS7 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cacna1fQ9JIS7 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cacna1fQ9JIS7 AC113441.2-201ENSMUST00000221538 1468 ntBASIC15.22■□□□□ 0.03
Cacna1fQ9JIS7 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Cacna1fQ9JIS7 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cacna1fQ9JIS7 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cacna1fQ9JIS7 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cacna1fQ9JIS7 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cacna1fQ9JIS7 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC15.22■□□□□ 0.03
Cacna1fQ9JIS7 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC15.22■□□□□ 0.03
Cacna1fQ9JIS7 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cacna1fQ9JIS7 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cacna1fQ9JIS7 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cacna1fQ9JIS7 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cacna1fQ9JIS7 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Cacna1fQ9JIS7 Gm3287-205ENSMUST00000228893 1332 ntBASIC15.22■□□□□ 0.03
Cacna1fQ9JIS7 Sybu-209ENSMUST00000228639 4113 ntBASIC15.22■□□□□ 0.03
Cacna1fQ9JIS7 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cacna1fQ9JIS7 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cacna1fQ9JIS7 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cacna1fQ9JIS7 AC139054.1-201ENSMUST00000226898 1598 ntBASIC15.22■□□□□ 0.03
Cacna1fQ9JIS7 Gm19221-201ENSMUST00000221827 1477 ntBASIC15.22■□□□□ 0.03
Cacna1fQ9JIS7 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cacna1fQ9JIS7 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cacna1fQ9JIS7 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cacna1fQ9JIS7 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC15.22■□□□□ 0.03
Cacna1fQ9JIS7 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC15.22■□□□□ 0.03
Cacna1fQ9JIS7 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC15.22■□□□□ 0.03
Cacna1fQ9JIS7 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cacna1fQ9JIS7 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cacna1fQ9JIS7 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cacna1fQ9JIS7 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cacna1fQ9JIS7 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cacna1fQ9JIS7 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cacna1fQ9JIS7 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
Cacna1fQ9JIS7 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cacna1fQ9JIS7 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cacna1fQ9JIS7 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cacna1fQ9JIS7 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cacna1fQ9JIS7 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cacna1fQ9JIS7 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cacna1fQ9JIS7 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cacna1fQ9JIS7 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cacna1fQ9JIS7 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cacna1fQ9JIS7 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Cacna1fQ9JIS7 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cacna1fQ9JIS7 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cacna1fQ9JIS7 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cacna1fQ9JIS7 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cacna1fQ9JIS7 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cacna1fQ9JIS7 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC15.21■□□□□ 0.03
Cacna1fQ9JIS7 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Cacna1fQ9JIS7 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC15.21■□□□□ 0.03
Cacna1fQ9JIS7 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Cacna1fQ9JIS7 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cacna1fQ9JIS7 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Cacna1fQ9JIS7 Gm43273-201ENSMUST00000199649 2594 ntBASIC15.21■□□□□ 0.03
Cacna1fQ9JIS7 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cacna1fQ9JIS7 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cacna1fQ9JIS7 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC15.21■□□□□ 0.02
Cacna1fQ9JIS7 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cacna1fQ9JIS7 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cacna1fQ9JIS7 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Cacna1fQ9JIS7 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Cacna1fQ9JIS7 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cacna1fQ9JIS7 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC15.2■□□□□ 0.02
Cacna1fQ9JIS7 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cacna1fQ9JIS7 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Cacna1fQ9JIS7 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cacna1fQ9JIS7 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC15.2■□□□□ 0.02
Cacna1fQ9JIS7 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cacna1fQ9JIS7 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cacna1fQ9JIS7 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cacna1fQ9JIS7 Gm12012-201ENSMUST00000118857 1066 ntBASIC15.2■□□□□ 0.02
Cacna1fQ9JIS7 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC15.2■□□□□ 0.02
Cacna1fQ9JIS7 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
Cacna1fQ9JIS7 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Cacna1fQ9JIS7 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC15.2■□□□□ 0.02
Cacna1fQ9JIS7 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC15.2■□□□□ 0.02
Cacna1fQ9JIS7 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cacna1fQ9JIS7 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cacna1fQ9JIS7 Rps4l-202ENSMUST00000204242 789 ntBASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms