Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim39Q9ESN2 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.78□□□□□ -0.36
Trim39Q9ESN2 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim39Q9ESN2 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim39Q9ESN2 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim39Q9ESN2 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim39Q9ESN2 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim39Q9ESN2 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC12.78□□□□□ -0.36
Trim39Q9ESN2 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC12.78□□□□□ -0.36
Trim39Q9ESN2 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim39Q9ESN2 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim39Q9ESN2 Gm18766-201ENSMUST00000189811 808 ntBASIC12.78□□□□□ -0.36
Trim39Q9ESN2 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim39Q9ESN2 Gm5779-201ENSMUST00000218467 910 ntBASIC12.78□□□□□ -0.36
Trim39Q9ESN2 AC121598.1-201ENSMUST00000228224 1019 ntBASIC12.78□□□□□ -0.36
Trim39Q9ESN2 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim39Q9ESN2 Gm8396-201ENSMUST00000057361 823 ntBASIC12.78□□□□□ -0.36
Trim39Q9ESN2 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim39Q9ESN2 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC12.78□□□□□ -0.36
Trim39Q9ESN2 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim39Q9ESN2 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.78□□□□□ -0.36
Trim39Q9ESN2 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim39Q9ESN2 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Trim39Q9ESN2 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim39Q9ESN2 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim39Q9ESN2 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim39Q9ESN2 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim39Q9ESN2 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim39Q9ESN2 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim39Q9ESN2 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim39Q9ESN2 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trim39Q9ESN2 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trim39Q9ESN2 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trim39Q9ESN2 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.77□□□□□ -0.36
Trim39Q9ESN2 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Trim39Q9ESN2 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trim39Q9ESN2 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.36
Trim39Q9ESN2 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trim39Q9ESN2 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trim39Q9ESN2 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Trim39Q9ESN2 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trim39Q9ESN2 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trim39Q9ESN2 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
Trim39Q9ESN2 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trim39Q9ESN2 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Trim39Q9ESN2 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trim39Q9ESN2 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trim39Q9ESN2 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim39Q9ESN2 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim39Q9ESN2 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim39Q9ESN2 Mir449b-201ENSMUST00000104833 80 ntBASIC12.77□□□□□ -0.37
Trim39Q9ESN2 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC12.77□□□□□ -0.37
Trim39Q9ESN2 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Trim39Q9ESN2 Gm12882-201ENSMUST00000121696 517 ntBASIC12.77□□□□□ -0.37
Trim39Q9ESN2 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC12.77□□□□□ -0.37
Trim39Q9ESN2 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
Trim39Q9ESN2 Gm29541-201ENSMUST00000191351 678 ntBASIC12.77□□□□□ -0.37
Trim39Q9ESN2 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC12.77□□□□□ -0.37
Trim39Q9ESN2 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC12.77□□□□□ -0.37
Trim39Q9ESN2 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC12.77□□□□□ -0.37
Trim39Q9ESN2 AC140397.2-201ENSMUST00000224213 834 ntBASIC12.77□□□□□ -0.37
Trim39Q9ESN2 AC149588.3-201ENSMUST00000227515 150 ntBASIC12.77□□□□□ -0.37
Trim39Q9ESN2 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Trim39Q9ESN2 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Trim39Q9ESN2 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim39Q9ESN2 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim39Q9ESN2 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trim39Q9ESN2 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim39Q9ESN2 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim39Q9ESN2 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.77□□□□□ -0.37
Trim39Q9ESN2 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim39Q9ESN2 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim39Q9ESN2 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim39Q9ESN2 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.77□□□□□ -0.37
Trim39Q9ESN2 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim39Q9ESN2 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim39Q9ESN2 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.77□□□□□ -0.37
Trim39Q9ESN2 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim39Q9ESN2 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.37
Trim39Q9ESN2 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
Trim39Q9ESN2 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim39Q9ESN2 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim39Q9ESN2 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim39Q9ESN2 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim39Q9ESN2 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim39Q9ESN2 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim39Q9ESN2 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim39Q9ESN2 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Trim39Q9ESN2 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.76□□□□□ -0.37
Trim39Q9ESN2 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim39Q9ESN2 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim39Q9ESN2 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim39Q9ESN2 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim39Q9ESN2 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Trim39Q9ESN2 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC12.76□□□□□ -0.37
Trim39Q9ESN2 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim39Q9ESN2 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Trim39Q9ESN2 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim39Q9ESN2 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim39Q9ESN2 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms