Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp2aQ9DB34 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC14.22□□□□□ -0.13
Chmp2aQ9DB34 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp2aQ9DB34 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp2aQ9DB34 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Chmp2aQ9DB34 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp2aQ9DB34 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp2aQ9DB34 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp2aQ9DB34 Gm24420-201ENSMUST00000176676 59 ntBASIC14.22□□□□□ -0.13
Chmp2aQ9DB34 AL593843.1-201ENSMUST00000195891 145 ntBASIC14.22□□□□□ -0.13
Chmp2aQ9DB34 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp2aQ9DB34 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp2aQ9DB34 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Chmp2aQ9DB34 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp2aQ9DB34 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Chmp2aQ9DB34 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp2aQ9DB34 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC14.22□□□□□ -0.13
Chmp2aQ9DB34 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Chmp2aQ9DB34 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp2aQ9DB34 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Chmp2aQ9DB34 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Chmp2aQ9DB34 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp2aQ9DB34 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp2aQ9DB34 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Chmp2aQ9DB34 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Chmp2aQ9DB34 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chmp2aQ9DB34 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chmp2aQ9DB34 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chmp2aQ9DB34 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chmp2aQ9DB34 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chmp2aQ9DB34 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chmp2aQ9DB34 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Chmp2aQ9DB34 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC14.21□□□□□ -0.13
Chmp2aQ9DB34 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC14.21□□□□□ -0.13
Chmp2aQ9DB34 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chmp2aQ9DB34 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC14.21□□□□□ -0.13
Chmp2aQ9DB34 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC14.21□□□□□ -0.13
Chmp2aQ9DB34 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC14.21□□□□□ -0.13
Chmp2aQ9DB34 Wdyhv1-206ENSMUST00000227142 786 ntBASIC14.21□□□□□ -0.13
Chmp2aQ9DB34 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chmp2aQ9DB34 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC14.21□□□□□ -0.13
Chmp2aQ9DB34 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC14.21□□□□□ -0.13
Chmp2aQ9DB34 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Chmp2aQ9DB34 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chmp2aQ9DB34 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Chmp2aQ9DB34 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Chmp2aQ9DB34 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Chmp2aQ9DB34 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Chmp2aQ9DB34 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Chmp2aQ9DB34 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Chmp2aQ9DB34 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Chmp2aQ9DB34 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Chmp2aQ9DB34 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Chmp2aQ9DB34 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp2aQ9DB34 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp2aQ9DB34 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp2aQ9DB34 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC14.2□□□□□ -0.14
Chmp2aQ9DB34 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp2aQ9DB34 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp2aQ9DB34 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Chmp2aQ9DB34 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp2aQ9DB34 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp2aQ9DB34 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Chmp2aQ9DB34 Gm38037-201ENSMUST00000192600 1624 ntBASIC14.2□□□□□ -0.14
Chmp2aQ9DB34 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp2aQ9DB34 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Chmp2aQ9DB34 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Chmp2aQ9DB34 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp2aQ9DB34 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp2aQ9DB34 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp2aQ9DB34 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Chmp2aQ9DB34 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Chmp2aQ9DB34 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC14.2□□□□□ -0.14
Chmp2aQ9DB34 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp2aQ9DB34 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp2aQ9DB34 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Chmp2aQ9DB34 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Chmp2aQ9DB34 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC14.2□□□□□ -0.14
Chmp2aQ9DB34 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp2aQ9DB34 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp2aQ9DB34 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp2aQ9DB34 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp2aQ9DB34 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp2aQ9DB34 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp2aQ9DB34 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp2aQ9DB34 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp2aQ9DB34 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp2aQ9DB34 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC14.2□□□□□ -0.14
Chmp2aQ9DB34 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp2aQ9DB34 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp2aQ9DB34 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
Chmp2aQ9DB34 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC14.2□□□□□ -0.14
Chmp2aQ9DB34 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp2aQ9DB34 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp2aQ9DB34 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Chmp2aQ9DB34 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp2aQ9DB34 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Chmp2aQ9DB34 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC14.19□□□□□ -0.14
Chmp2aQ9DB34 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Chmp2aQ9DB34 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms