Protein–RNA interactions for Protein: Q9D6I0

Rtl8c, Cxx1c protein, mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl8cQ9D6I0 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.2□□□□□ -0.46
Rtl8cQ9D6I0 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Rtl8cQ9D6I0 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.2□□□□□ -0.46
Rtl8cQ9D6I0 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Rtl8cQ9D6I0 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rtl8cQ9D6I0 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rtl8cQ9D6I0 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Rtl8cQ9D6I0 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
Rtl8cQ9D6I0 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rtl8cQ9D6I0 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rtl8cQ9D6I0 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rtl8cQ9D6I0 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rtl8cQ9D6I0 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC12.2□□□□□ -0.46
Rtl8cQ9D6I0 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Rtl8cQ9D6I0 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Rtl8cQ9D6I0 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.19□□□□□ -0.46
Rtl8cQ9D6I0 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rtl8cQ9D6I0 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rtl8cQ9D6I0 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rtl8cQ9D6I0 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rtl8cQ9D6I0 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rtl8cQ9D6I0 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rtl8cQ9D6I0 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC12.19□□□□□ -0.46
Rtl8cQ9D6I0 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rtl8cQ9D6I0 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rtl8cQ9D6I0 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rtl8cQ9D6I0 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
Rtl8cQ9D6I0 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rtl8cQ9D6I0 Mir7684-201ENSMUST00000183858 60 ntBASIC12.19□□□□□ -0.46
Rtl8cQ9D6I0 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Rtl8cQ9D6I0 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rtl8cQ9D6I0 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rtl8cQ9D6I0 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Rtl8cQ9D6I0 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rtl8cQ9D6I0 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Rtl8cQ9D6I0 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rtl8cQ9D6I0 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rtl8cQ9D6I0 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rtl8cQ9D6I0 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rtl8cQ9D6I0 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Rtl8cQ9D6I0 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rtl8cQ9D6I0 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rtl8cQ9D6I0 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rtl8cQ9D6I0 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Rtl8cQ9D6I0 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC12.19□□□□□ -0.46
Rtl8cQ9D6I0 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rtl8cQ9D6I0 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rtl8cQ9D6I0 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rtl8cQ9D6I0 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rtl8cQ9D6I0 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rtl8cQ9D6I0 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Rtl8cQ9D6I0 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rtl8cQ9D6I0 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Rtl8cQ9D6I0 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rtl8cQ9D6I0 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rtl8cQ9D6I0 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rtl8cQ9D6I0 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rtl8cQ9D6I0 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rtl8cQ9D6I0 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rtl8cQ9D6I0 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Rtl8cQ9D6I0 Gm45003-201ENSMUST00000205875 2158 ntBASIC12.18□□□□□ -0.46
Rtl8cQ9D6I0 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rtl8cQ9D6I0 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rtl8cQ9D6I0 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rtl8cQ9D6I0 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC12.18□□□□□ -0.46
Rtl8cQ9D6I0 Gm4875-201ENSMUST00000118257 786 ntBASIC12.18□□□□□ -0.46
Rtl8cQ9D6I0 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC12.18□□□□□ -0.46
Rtl8cQ9D6I0 Mir8102-201ENSMUST00000184148 139 ntBASIC12.18□□□□□ -0.46
Rtl8cQ9D6I0 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC12.18□□□□□ -0.46
Rtl8cQ9D6I0 AC165157.4-201ENSMUST00000220587 139 ntBASIC12.18□□□□□ -0.46
Rtl8cQ9D6I0 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rtl8cQ9D6I0 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rtl8cQ9D6I0 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rtl8cQ9D6I0 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rtl8cQ9D6I0 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rtl8cQ9D6I0 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC12.18□□□□□ -0.46
Rtl8cQ9D6I0 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rtl8cQ9D6I0 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rtl8cQ9D6I0 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rtl8cQ9D6I0 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rtl8cQ9D6I0 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rtl8cQ9D6I0 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Rtl8cQ9D6I0 Gm14752-201ENSMUST00000120719 2075 ntBASIC12.18□□□□□ -0.46
Rtl8cQ9D6I0 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rtl8cQ9D6I0 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rtl8cQ9D6I0 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rtl8cQ9D6I0 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rtl8cQ9D6I0 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Rtl8cQ9D6I0 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rtl8cQ9D6I0 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rtl8cQ9D6I0 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rtl8cQ9D6I0 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rtl8cQ9D6I0 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rtl8cQ9D6I0 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rtl8cQ9D6I0 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rtl8cQ9D6I0 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rtl8cQ9D6I0 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rtl8cQ9D6I0 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rtl8cQ9D6I0 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rtl8cQ9D6I0 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms