Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Gm18934-201ENSMUST00000216671 1044 ntBASIC16.02■□□□□ 0.16
Smc3Q9CW03 Gm9229-201ENSMUST00000222777 126 ntBASIC16.02■□□□□ 0.16
Smc3Q9CW03 Gm3222-201ENSMUST00000071282 990 ntBASIC16.02■□□□□ 0.16
Smc3Q9CW03 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Smc3Q9CW03 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Smc3Q9CW03 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Smc3Q9CW03 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Smc3Q9CW03 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Smc3Q9CW03 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Smc3Q9CW03 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Smc3Q9CW03 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Smc3Q9CW03 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Smc3Q9CW03 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Smc3Q9CW03 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Smc3Q9CW03 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smc3Q9CW03 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smc3Q9CW03 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smc3Q9CW03 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Smc3Q9CW03 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smc3Q9CW03 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smc3Q9CW03 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smc3Q9CW03 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Smc3Q9CW03 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smc3Q9CW03 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC16.01■□□□□ 0.15
Smc3Q9CW03 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Smc3Q9CW03 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Smc3Q9CW03 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Smc3Q9CW03 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smc3Q9CW03 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC16.01■□□□□ 0.15
Smc3Q9CW03 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC16.01■□□□□ 0.15
Smc3Q9CW03 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC16.01■□□□□ 0.15
Smc3Q9CW03 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC16.01■□□□□ 0.15
Smc3Q9CW03 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
Smc3Q9CW03 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Smc3Q9CW03 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Smc3Q9CW03 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Smc3Q9CW03 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC16.01■□□□□ 0.15
Smc3Q9CW03 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC16.01■□□□□ 0.15
Smc3Q9CW03 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC16.01■□□□□ 0.15
Smc3Q9CW03 Gm27533-201ENSMUST00000183800 152 ntBASIC16.01■□□□□ 0.15
Smc3Q9CW03 Gm2213-201ENSMUST00000197485 688 ntBASIC16.01■□□□□ 0.15
Smc3Q9CW03 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC16.01■□□□□ 0.15
Smc3Q9CW03 Gm46209-201ENSMUST00000217912 553 ntBASIC16.01■□□□□ 0.15
Smc3Q9CW03 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Smc3Q9CW03 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smc3Q9CW03 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smc3Q9CW03 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smc3Q9CW03 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC16.01■□□□□ 0.15
Smc3Q9CW03 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smc3Q9CW03 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smc3Q9CW03 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smc3Q9CW03 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smc3Q9CW03 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smc3Q9CW03 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Smc3Q9CW03 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Smc3Q9CW03 Gm37644-201ENSMUST00000192190 2270 ntBASIC16.01■□□□□ 0.15
Smc3Q9CW03 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC16■□□□□ 0.15
Smc3Q9CW03 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Smc3Q9CW03 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Smc3Q9CW03 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC16■□□□□ 0.15
Smc3Q9CW03 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Smc3Q9CW03 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC16■□□□□ 0.15
Smc3Q9CW03 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Smc3Q9CW03 Gm8775-201ENSMUST00000170943 1327 ntBASIC16■□□□□ 0.15
Smc3Q9CW03 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC16■□□□□ 0.15
Smc3Q9CW03 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Smc3Q9CW03 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Smc3Q9CW03 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Smc3Q9CW03 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
Smc3Q9CW03 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Smc3Q9CW03 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Smc3Q9CW03 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC16■□□□□ 0.15
Smc3Q9CW03 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC16■□□□□ 0.15
Smc3Q9CW03 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Smc3Q9CW03 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
Smc3Q9CW03 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC16■□□□□ 0.15
Smc3Q9CW03 Gm6283-201ENSMUST00000182369 1000 ntBASIC16■□□□□ 0.15
Smc3Q9CW03 AC151286.1-201ENSMUST00000198489 145 ntBASIC16■□□□□ 0.15
Smc3Q9CW03 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC16■□□□□ 0.15
Smc3Q9CW03 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC16■□□□□ 0.15
Smc3Q9CW03 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Smc3Q9CW03 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Smc3Q9CW03 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC16■□□□□ 0.15
Smc3Q9CW03 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Smc3Q9CW03 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Smc3Q9CW03 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Smc3Q9CW03 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Smc3Q9CW03 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Smc3Q9CW03 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Smc3Q9CW03 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
Smc3Q9CW03 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Smc3Q9CW03 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Smc3Q9CW03 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC16■□□□□ 0.15
Smc3Q9CW03 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Smc3Q9CW03 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Smc3Q9CW03 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Smc3Q9CW03 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Smc3Q9CW03 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Smc3Q9CW03 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Smc3Q9CW03 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms