Protein–RNA interactions for Protein: Q99NB9

Sf3b1, Splicing factor 3B subunit 1, mousemouse

Known RBP Predictions only

Length 1,304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1Q99NB9 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
Sf3b1Q99NB9 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sf3b1Q99NB9 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sf3b1Q99NB9 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sf3b1Q99NB9 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC14.43□□□□□ -0.1
Sf3b1Q99NB9 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sf3b1Q99NB9 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Sf3b1Q99NB9 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sf3b1Q99NB9 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sf3b1Q99NB9 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Sf3b1Q99NB9 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Sf3b1Q99NB9 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Sf3b1Q99NB9 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sf3b1Q99NB9 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC14.42□□□□□ -0.1
Sf3b1Q99NB9 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Sf3b1Q99NB9 Snora78-201ENSMUST00000158630 128 ntBASIC14.42□□□□□ -0.1
Sf3b1Q99NB9 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Sf3b1Q99NB9 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Sf3b1Q99NB9 Gm42442-201ENSMUST00000197951 1133 ntBASIC14.42□□□□□ -0.1
Sf3b1Q99NB9 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC14.42□□□□□ -0.1
Sf3b1Q99NB9 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC14.42□□□□□ -0.1
Sf3b1Q99NB9 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sf3b1Q99NB9 Gm10012-201ENSMUST00000078252 192 ntBASIC14.42□□□□□ -0.1
Sf3b1Q99NB9 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Sf3b1Q99NB9 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Sf3b1Q99NB9 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sf3b1Q99NB9 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sf3b1Q99NB9 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sf3b1Q99NB9 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC14.42□□□□□ -0.1
Sf3b1Q99NB9 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sf3b1Q99NB9 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sf3b1Q99NB9 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Sf3b1Q99NB9 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sf3b1Q99NB9 Gm9200-201ENSMUST00000118513 1354 ntBASIC14.42□□□□□ -0.1
Sf3b1Q99NB9 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sf3b1Q99NB9 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sf3b1Q99NB9 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.42□□□□□ -0.1
Sf3b1Q99NB9 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sf3b1Q99NB9 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Sf3b1Q99NB9 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Sf3b1Q99NB9 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sf3b1Q99NB9 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Sf3b1Q99NB9 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sf3b1Q99NB9 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sf3b1Q99NB9 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sf3b1Q99NB9 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sf3b1Q99NB9 Gm12957-201ENSMUST00000117835 377 ntBASIC14.41□□□□□ -0.1
Sf3b1Q99NB9 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC14.41□□□□□ -0.1
Sf3b1Q99NB9 Gm6152-201ENSMUST00000151704 340 ntBASIC14.41□□□□□ -0.1
Sf3b1Q99NB9 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sf3b1Q99NB9 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sf3b1Q99NB9 Gm29127-201ENSMUST00000188304 517 ntBASIC14.41□□□□□ -0.1
Sf3b1Q99NB9 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC14.41□□□□□ -0.1
Sf3b1Q99NB9 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC14.41□□□□□ -0.1
Sf3b1Q99NB9 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC14.41□□□□□ -0.1
Sf3b1Q99NB9 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sf3b1Q99NB9 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sf3b1Q99NB9 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sf3b1Q99NB9 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
Sf3b1Q99NB9 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sf3b1Q99NB9 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
Sf3b1Q99NB9 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sf3b1Q99NB9 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sf3b1Q99NB9 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.41□□□□□ -0.1
Sf3b1Q99NB9 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Sf3b1Q99NB9 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sf3b1Q99NB9 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Sf3b1Q99NB9 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sf3b1Q99NB9 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sf3b1Q99NB9 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sf3b1Q99NB9 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sf3b1Q99NB9 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sf3b1Q99NB9 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sf3b1Q99NB9 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sf3b1Q99NB9 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sf3b1Q99NB9 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC14.41□□□□□ -0.1
Sf3b1Q99NB9 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC14.41□□□□□ -0.1
Sf3b1Q99NB9 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sf3b1Q99NB9 Trav4d-2-201ENSMUST00000120914 335 ntBASIC14.41□□□□□ -0.1
Sf3b1Q99NB9 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sf3b1Q99NB9 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sf3b1Q99NB9 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sf3b1Q99NB9 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sf3b1Q99NB9 Gm9299-201ENSMUST00000206392 1140 ntBASIC14.41□□□□□ -0.1
Sf3b1Q99NB9 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
Sf3b1Q99NB9 Gm17330-201ENSMUST00000221047 165 ntBASIC14.41□□□□□ -0.1
Sf3b1Q99NB9 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sf3b1Q99NB9 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC14.41□□□□□ -0.1
Sf3b1Q99NB9 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC14.41□□□□□ -0.1
Sf3b1Q99NB9 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sf3b1Q99NB9 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC14.4□□□□□ -0.1
Sf3b1Q99NB9 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Sf3b1Q99NB9 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC14.4□□□□□ -0.1
Sf3b1Q99NB9 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sf3b1Q99NB9 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sf3b1Q99NB9 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sf3b1Q99NB9 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sf3b1Q99NB9 Gm12020-201ENSMUST00000119030 2042 ntBASIC14.4□□□□□ -0.1
Sf3b1Q99NB9 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Sf3b1Q99NB9 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms