Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cdk5rap3Q99LM2 Gm8410-201ENSMUST00000117225 605 ntBASIC14.12□□□□□ -0.15
Cdk5rap3Q99LM2 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC14.12□□□□□ -0.15
Cdk5rap3Q99LM2 Gm15693-201ENSMUST00000120470 637 ntBASIC14.12□□□□□ -0.15
Cdk5rap3Q99LM2 Gm27397-201ENSMUST00000184997 107 ntBASIC14.12□□□□□ -0.15
Cdk5rap3Q99LM2 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC14.12□□□□□ -0.15
Cdk5rap3Q99LM2 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC14.12□□□□□ -0.15
Cdk5rap3Q99LM2 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Cdk5rap3Q99LM2 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdk5rap3Q99LM2 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Cdk5rap3Q99LM2 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdk5rap3Q99LM2 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdk5rap3Q99LM2 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdk5rap3Q99LM2 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cdk5rap3Q99LM2 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdk5rap3Q99LM2 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC14.12□□□□□ -0.15
Cdk5rap3Q99LM2 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdk5rap3Q99LM2 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC14.12□□□□□ -0.15
Cdk5rap3Q99LM2 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdk5rap3Q99LM2 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdk5rap3Q99LM2 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdk5rap3Q99LM2 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdk5rap3Q99LM2 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdk5rap3Q99LM2 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdk5rap3Q99LM2 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdk5rap3Q99LM2 AC238940.1-201ENSMUST00000225106 1858 ntBASIC14.12□□□□□ -0.15
Cdk5rap3Q99LM2 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Cdk5rap3Q99LM2 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdk5rap3Q99LM2 Gm13730-201ENSMUST00000121036 1462 ntBASIC14.12□□□□□ -0.15
Cdk5rap3Q99LM2 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cdk5rap3Q99LM2 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdk5rap3Q99LM2 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Cdk5rap3Q99LM2 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cdk5rap3Q99LM2 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Cdk5rap3Q99LM2 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Cdk5rap3Q99LM2 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdk5rap3Q99LM2 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdk5rap3Q99LM2 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC14.11□□□□□ -0.15
Cdk5rap3Q99LM2 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdk5rap3Q99LM2 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC14.11□□□□□ -0.15
Cdk5rap3Q99LM2 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdk5rap3Q99LM2 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Cdk5rap3Q99LM2 Gm37644-201ENSMUST00000192190 2270 ntBASIC14.11□□□□□ -0.15
Cdk5rap3Q99LM2 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdk5rap3Q99LM2 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdk5rap3Q99LM2 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdk5rap3Q99LM2 Gm11557-201ENSMUST00000120200 1008 ntBASIC14.11□□□□□ -0.15
Cdk5rap3Q99LM2 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
Cdk5rap3Q99LM2 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdk5rap3Q99LM2 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC14.11□□□□□ -0.15
Cdk5rap3Q99LM2 Gm8927-201ENSMUST00000181978 981 ntBASIC14.11□□□□□ -0.15
Cdk5rap3Q99LM2 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC14.11□□□□□ -0.15
Cdk5rap3Q99LM2 AC140397.2-201ENSMUST00000224213 834 ntBASIC14.11□□□□□ -0.15
Cdk5rap3Q99LM2 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdk5rap3Q99LM2 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdk5rap3Q99LM2 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdk5rap3Q99LM2 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Cdk5rap3Q99LM2 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdk5rap3Q99LM2 Gm3222-201ENSMUST00000071282 990 ntBASIC14.11□□□□□ -0.15
Cdk5rap3Q99LM2 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdk5rap3Q99LM2 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Cdk5rap3Q99LM2 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cdk5rap3Q99LM2 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdk5rap3Q99LM2 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Cdk5rap3Q99LM2 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdk5rap3Q99LM2 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cdk5rap3Q99LM2 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdk5rap3Q99LM2 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cdk5rap3Q99LM2 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC14.11□□□□□ -0.15
Cdk5rap3Q99LM2 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdk5rap3Q99LM2 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cdk5rap3Q99LM2 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC14.11□□□□□ -0.15
Cdk5rap3Q99LM2 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Cdk5rap3Q99LM2 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cdk5rap3Q99LM2 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cdk5rap3Q99LM2 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdk5rap3Q99LM2 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdk5rap3Q99LM2 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdk5rap3Q99LM2 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Cdk5rap3Q99LM2 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdk5rap3Q99LM2 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cdk5rap3Q99LM2 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdk5rap3Q99LM2 Mir449b-201ENSMUST00000104833 80 ntBASIC14.1□□□□□ -0.15
Cdk5rap3Q99LM2 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdk5rap3Q99LM2 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Cdk5rap3Q99LM2 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC14.1□□□□□ -0.15
Cdk5rap3Q99LM2 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC14.1□□□□□ -0.15
Cdk5rap3Q99LM2 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cdk5rap3Q99LM2 Gm6283-201ENSMUST00000182369 1000 ntBASIC14.1□□□□□ -0.15
Cdk5rap3Q99LM2 Gm27622-201ENSMUST00000183779 60 ntBASIC14.1□□□□□ -0.15
Cdk5rap3Q99LM2 Gm27533-201ENSMUST00000183800 152 ntBASIC14.1□□□□□ -0.15
Cdk5rap3Q99LM2 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC14.1□□□□□ -0.15
Cdk5rap3Q99LM2 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cdk5rap3Q99LM2 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC14.1□□□□□ -0.15
Cdk5rap3Q99LM2 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cdk5rap3Q99LM2 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC14.1□□□□□ -0.15
Cdk5rap3Q99LM2 Gm9229-201ENSMUST00000222777 126 ntBASIC14.1□□□□□ -0.15
Cdk5rap3Q99LM2 Chchd1-203ENSMUST00000224633 557 ntBASIC14.1□□□□□ -0.15
Cdk5rap3Q99LM2 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cdk5rap3Q99LM2 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms