Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.17□□□□□ -0.3
Cstf3Q99LI7 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cstf3Q99LI7 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cstf3Q99LI7 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC13.17□□□□□ -0.3
Cstf3Q99LI7 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cstf3Q99LI7 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cstf3Q99LI7 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Cstf3Q99LI7 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cstf3Q99LI7 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cstf3Q99LI7 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC13.17□□□□□ -0.3
Cstf3Q99LI7 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cstf3Q99LI7 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.17□□□□□ -0.3
Cstf3Q99LI7 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cstf3Q99LI7 Gm25925-201ENSMUST00000158314 306 ntBASIC13.17□□□□□ -0.3
Cstf3Q99LI7 Gm37277-201ENSMUST00000194052 1111 ntBASIC13.17□□□□□ -0.3
Cstf3Q99LI7 Gm18934-201ENSMUST00000216671 1044 ntBASIC13.17□□□□□ -0.3
Cstf3Q99LI7 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC13.17□□□□□ -0.3
Cstf3Q99LI7 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cstf3Q99LI7 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cstf3Q99LI7 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cstf3Q99LI7 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cstf3Q99LI7 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cstf3Q99LI7 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Cstf3Q99LI7 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cstf3Q99LI7 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cstf3Q99LI7 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cstf3Q99LI7 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Cstf3Q99LI7 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
Cstf3Q99LI7 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.17□□□□□ -0.3
Cstf3Q99LI7 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cstf3Q99LI7 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cstf3Q99LI7 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cstf3Q99LI7 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC13.17□□□□□ -0.3
Cstf3Q99LI7 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cstf3Q99LI7 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cstf3Q99LI7 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cstf3Q99LI7 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cstf3Q99LI7 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.17□□□□□ -0.3
Cstf3Q99LI7 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cstf3Q99LI7 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cstf3Q99LI7 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cstf3Q99LI7 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cstf3Q99LI7 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cstf3Q99LI7 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cstf3Q99LI7 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cstf3Q99LI7 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cstf3Q99LI7 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.16□□□□□ -0.3
Cstf3Q99LI7 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cstf3Q99LI7 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cstf3Q99LI7 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cstf3Q99LI7 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cstf3Q99LI7 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cstf3Q99LI7 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC13.16□□□□□ -0.3
Cstf3Q99LI7 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cstf3Q99LI7 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cstf3Q99LI7 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cstf3Q99LI7 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cstf3Q99LI7 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cstf3Q99LI7 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Cstf3Q99LI7 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC13.16□□□□□ -0.3
Cstf3Q99LI7 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cstf3Q99LI7 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cstf3Q99LI7 Gm27321-201ENSMUST00000185021 205 ntBASIC13.16□□□□□ -0.3
Cstf3Q99LI7 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC13.16□□□□□ -0.3
Cstf3Q99LI7 Gm37171-201ENSMUST00000192636 1185 ntBASIC13.16□□□□□ -0.3
Cstf3Q99LI7 Gm6888-201ENSMUST00000221983 706 ntBASIC13.16□□□□□ -0.3
Cstf3Q99LI7 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cstf3Q99LI7 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Cstf3Q99LI7 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cstf3Q99LI7 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cstf3Q99LI7 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cstf3Q99LI7 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cstf3Q99LI7 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cstf3Q99LI7 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cstf3Q99LI7 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cstf3Q99LI7 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC13.16□□□□□ -0.3
Cstf3Q99LI7 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cstf3Q99LI7 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cstf3Q99LI7 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Cstf3Q99LI7 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.16□□□□□ -0.3
Cstf3Q99LI7 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cstf3Q99LI7 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cstf3Q99LI7 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cstf3Q99LI7 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cstf3Q99LI7 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Cstf3Q99LI7 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Cstf3Q99LI7 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cstf3Q99LI7 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cstf3Q99LI7 AC164107.1-201ENSMUST00000227730 2161 ntBASIC13.15□□□□□ -0.3
Cstf3Q99LI7 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cstf3Q99LI7 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Cstf3Q99LI7 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.15□□□□□ -0.3
Cstf3Q99LI7 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cstf3Q99LI7 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cstf3Q99LI7 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.15□□□□□ -0.3
Cstf3Q99LI7 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cstf3Q99LI7 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cstf3Q99LI7 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cstf3Q99LI7 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cstf3Q99LI7 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms