Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vps39Q8R5L3 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vps39Q8R5L3 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Vps39Q8R5L3 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Vps39Q8R5L3 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vps39Q8R5L3 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Vps39Q8R5L3 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Vps39Q8R5L3 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Vps39Q8R5L3 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vps39Q8R5L3 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vps39Q8R5L3 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Vps39Q8R5L3 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Vps39Q8R5L3 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vps39Q8R5L3 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vps39Q8R5L3 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vps39Q8R5L3 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vps39Q8R5L3 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Vps39Q8R5L3 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Vps39Q8R5L3 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Vps39Q8R5L3 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vps39Q8R5L3 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC13.65□□□□□ -0.22
Vps39Q8R5L3 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC13.65□□□□□ -0.22
Vps39Q8R5L3 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC13.65□□□□□ -0.22
Vps39Q8R5L3 Gm18041-201ENSMUST00000218210 618 ntBASIC13.65□□□□□ -0.22
Vps39Q8R5L3 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vps39Q8R5L3 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vps39Q8R5L3 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vps39Q8R5L3 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vps39Q8R5L3 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vps39Q8R5L3 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vps39Q8R5L3 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vps39Q8R5L3 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Vps39Q8R5L3 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vps39Q8R5L3 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vps39Q8R5L3 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC13.65□□□□□ -0.22
Vps39Q8R5L3 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vps39Q8R5L3 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Vps39Q8R5L3 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vps39Q8R5L3 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vps39Q8R5L3 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vps39Q8R5L3 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vps39Q8R5L3 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.65□□□□□ -0.22
Vps39Q8R5L3 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vps39Q8R5L3 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.65□□□□□ -0.23
Vps39Q8R5L3 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Vps39Q8R5L3 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Vps39Q8R5L3 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps39Q8R5L3 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps39Q8R5L3 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Vps39Q8R5L3 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Vps39Q8R5L3 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Vps39Q8R5L3 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps39Q8R5L3 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps39Q8R5L3 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC13.64□□□□□ -0.23
Vps39Q8R5L3 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Vps39Q8R5L3 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps39Q8R5L3 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.64□□□□□ -0.23
Vps39Q8R5L3 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps39Q8R5L3 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps39Q8R5L3 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Vps39Q8R5L3 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps39Q8R5L3 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps39Q8R5L3 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Vps39Q8R5L3 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps39Q8R5L3 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps39Q8R5L3 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Vps39Q8R5L3 AC131997.1-201ENSMUST00000228611 1229 ntBASIC13.64□□□□□ -0.23
Vps39Q8R5L3 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps39Q8R5L3 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Vps39Q8R5L3 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Vps39Q8R5L3 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.64□□□□□ -0.23
Vps39Q8R5L3 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps39Q8R5L3 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps39Q8R5L3 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Vps39Q8R5L3 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC13.64□□□□□ -0.23
Vps39Q8R5L3 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Vps39Q8R5L3 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
Vps39Q8R5L3 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps39Q8R5L3 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC13.64□□□□□ -0.23
Vps39Q8R5L3 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps39Q8R5L3 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps39Q8R5L3 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC13.64□□□□□ -0.23
Vps39Q8R5L3 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps39Q8R5L3 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps39Q8R5L3 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Vps39Q8R5L3 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Vps39Q8R5L3 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Vps39Q8R5L3 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Vps39Q8R5L3 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Vps39Q8R5L3 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vps39Q8R5L3 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Vps39Q8R5L3 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vps39Q8R5L3 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vps39Q8R5L3 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vps39Q8R5L3 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vps39Q8R5L3 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC13.63□□□□□ -0.23
Vps39Q8R5L3 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vps39Q8R5L3 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Vps39Q8R5L3 Gm6912-201ENSMUST00000117218 544 ntBASIC13.63□□□□□ -0.23
Vps39Q8R5L3 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms