Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Atf7Q8R0S1 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Atf7Q8R0S1 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Atf7Q8R0S1 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Atf7Q8R0S1 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Atf7Q8R0S1 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Atf7Q8R0S1 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Atf7Q8R0S1 Gm22189-201ENSMUST00000103822 86 ntBASIC16.07■□□□□ 0.16
Atf7Q8R0S1 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC16.07■□□□□ 0.16
Atf7Q8R0S1 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC16.07■□□□□ 0.16
Atf7Q8R0S1 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC16.07■□□□□ 0.16
Atf7Q8R0S1 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Atf7Q8R0S1 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Atf7Q8R0S1 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC16.07■□□□□ 0.16
Atf7Q8R0S1 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC16.07■□□□□ 0.16
Atf7Q8R0S1 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Atf7Q8R0S1 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Atf7Q8R0S1 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Atf7Q8R0S1 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Atf7Q8R0S1 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC16.07■□□□□ 0.16
Atf7Q8R0S1 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Atf7Q8R0S1 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Atf7Q8R0S1 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Atf7Q8R0S1 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Atf7Q8R0S1 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Atf7Q8R0S1 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC16.07■□□□□ 0.16
Atf7Q8R0S1 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Atf7Q8R0S1 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Atf7Q8R0S1 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC16.07■□□□□ 0.16
Atf7Q8R0S1 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Atf7Q8R0S1 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Atf7Q8R0S1 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Atf7Q8R0S1 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Atf7Q8R0S1 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Atf7Q8R0S1 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
Atf7Q8R0S1 Grk6-205ENSMUST00000224653 2976 ntBASIC16.06■□□□□ 0.16
Atf7Q8R0S1 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Atf7Q8R0S1 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Atf7Q8R0S1 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Atf7Q8R0S1 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Atf7Q8R0S1 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Atf7Q8R0S1 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC16.06■□□□□ 0.16
Atf7Q8R0S1 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Atf7Q8R0S1 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC16.06■□□□□ 0.16
Atf7Q8R0S1 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Atf7Q8R0S1 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Atf7Q8R0S1 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC16.06■□□□□ 0.16
Atf7Q8R0S1 Gm17330-201ENSMUST00000221047 165 ntBASIC16.06■□□□□ 0.16
Atf7Q8R0S1 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Atf7Q8R0S1 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Atf7Q8R0S1 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Atf7Q8R0S1 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
Atf7Q8R0S1 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Atf7Q8R0S1 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Atf7Q8R0S1 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Atf7Q8R0S1 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Atf7Q8R0S1 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
Atf7Q8R0S1 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Atf7Q8R0S1 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Atf7Q8R0S1 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Atf7Q8R0S1 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Atf7Q8R0S1 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Atf7Q8R0S1 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Atf7Q8R0S1 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Atf7Q8R0S1 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Atf7Q8R0S1 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Atf7Q8R0S1 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
Atf7Q8R0S1 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Atf7Q8R0S1 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Atf7Q8R0S1 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atf7Q8R0S1 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atf7Q8R0S1 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atf7Q8R0S1 Gm13730-201ENSMUST00000121036 1462 ntBASIC16.05■□□□□ 0.16
Atf7Q8R0S1 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atf7Q8R0S1 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC16.05■□□□□ 0.16
Atf7Q8R0S1 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atf7Q8R0S1 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Atf7Q8R0S1 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atf7Q8R0S1 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atf7Q8R0S1 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC16.05■□□□□ 0.16
Atf7Q8R0S1 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atf7Q8R0S1 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC16.05■□□□□ 0.16
Atf7Q8R0S1 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atf7Q8R0S1 Gm28760-201ENSMUST00000185995 736 ntBASIC16.05■□□□□ 0.16
Atf7Q8R0S1 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC16.05■□□□□ 0.16
Atf7Q8R0S1 Gm43094-201ENSMUST00000196549 921 ntBASIC16.05■□□□□ 0.16
Atf7Q8R0S1 Gm45195-201ENSMUST00000205597 1008 ntBASIC16.05■□□□□ 0.16
Atf7Q8R0S1 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atf7Q8R0S1 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atf7Q8R0S1 Gm4782-201ENSMUST00000168705 2046 ntBASIC16.05■□□□□ 0.16
Atf7Q8R0S1 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atf7Q8R0S1 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Atf7Q8R0S1 Gm38346-201ENSMUST00000192379 2639 ntBASIC16.05■□□□□ 0.16
Atf7Q8R0S1 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atf7Q8R0S1 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Atf7Q8R0S1 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atf7Q8R0S1 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Atf7Q8R0S1 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atf7Q8R0S1 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Atf7Q8R0S1 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms