Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Clip4Q8CI96 Mypopos-202ENSMUST00000205975 2321 ntBASIC13.75□□□□□ -0.21
Clip4Q8CI96 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Clip4Q8CI96 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Clip4Q8CI96 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Clip4Q8CI96 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
Clip4Q8CI96 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
Clip4Q8CI96 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Clip4Q8CI96 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Clip4Q8CI96 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Clip4Q8CI96 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.74□□□□□ -0.21
Clip4Q8CI96 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Clip4Q8CI96 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.74□□□□□ -0.21
Clip4Q8CI96 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Clip4Q8CI96 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13.74□□□□□ -0.21
Clip4Q8CI96 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Clip4Q8CI96 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Clip4Q8CI96 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Clip4Q8CI96 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Clip4Q8CI96 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Clip4Q8CI96 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Clip4Q8CI96 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Clip4Q8CI96 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Clip4Q8CI96 Gm45667-201ENSMUST00000210380 1316 ntBASIC13.74□□□□□ -0.21
Clip4Q8CI96 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Clip4Q8CI96 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Clip4Q8CI96 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC13.74□□□□□ -0.21
Clip4Q8CI96 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC13.74□□□□□ -0.21
Clip4Q8CI96 Gm4875-201ENSMUST00000118257 786 ntBASIC13.74□□□□□ -0.21
Clip4Q8CI96 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC13.74□□□□□ -0.21
Clip4Q8CI96 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC13.74□□□□□ -0.21
Clip4Q8CI96 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC13.74□□□□□ -0.21
Clip4Q8CI96 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC13.74□□□□□ -0.21
Clip4Q8CI96 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Clip4Q8CI96 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Clip4Q8CI96 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Clip4Q8CI96 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Clip4Q8CI96 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Clip4Q8CI96 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Clip4Q8CI96 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Clip4Q8CI96 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Clip4Q8CI96 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Clip4Q8CI96 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.74□□□□□ -0.21
Clip4Q8CI96 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Clip4Q8CI96 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC13.74□□□□□ -0.21
Clip4Q8CI96 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Clip4Q8CI96 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.74□□□□□ -0.21
Clip4Q8CI96 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Clip4Q8CI96 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Clip4Q8CI96 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Clip4Q8CI96 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Clip4Q8CI96 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Clip4Q8CI96 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Clip4Q8CI96 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Clip4Q8CI96 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Clip4Q8CI96 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Clip4Q8CI96 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
Clip4Q8CI96 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Clip4Q8CI96 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Clip4Q8CI96 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Clip4Q8CI96 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Clip4Q8CI96 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
Clip4Q8CI96 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC13.73□□□□□ -0.21
Clip4Q8CI96 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Clip4Q8CI96 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Clip4Q8CI96 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Clip4Q8CI96 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.73□□□□□ -0.21
Clip4Q8CI96 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC13.73□□□□□ -0.21
Clip4Q8CI96 Gm7063-201ENSMUST00000186840 981 ntBASIC13.73□□□□□ -0.21
Clip4Q8CI96 Ighv1-25-201ENSMUST00000195638 345 ntBASIC13.73□□□□□ -0.21
Clip4Q8CI96 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Clip4Q8CI96 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.73□□□□□ -0.21
Clip4Q8CI96 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Clip4Q8CI96 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
Clip4Q8CI96 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Clip4Q8CI96 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Clip4Q8CI96 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Clip4Q8CI96 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Clip4Q8CI96 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Clip4Q8CI96 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Clip4Q8CI96 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Clip4Q8CI96 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Clip4Q8CI96 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Clip4Q8CI96 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Clip4Q8CI96 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.72□□□□□ -0.21
Clip4Q8CI96 Syt7-204ENSMUST00000223586 1344 ntBASIC13.72□□□□□ -0.21
Clip4Q8CI96 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Clip4Q8CI96 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Clip4Q8CI96 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Clip4Q8CI96 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Clip4Q8CI96 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Clip4Q8CI96 Gm7820-201ENSMUST00000121012 1052 ntBASIC13.72□□□□□ -0.21
Clip4Q8CI96 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC13.72□□□□□ -0.21
Clip4Q8CI96 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC13.72□□□□□ -0.21
Clip4Q8CI96 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC13.72□□□□□ -0.21
Clip4Q8CI96 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Clip4Q8CI96 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Clip4Q8CI96 Gm33320-201ENSMUST00000192232 530 ntBASIC13.72□□□□□ -0.21
Clip4Q8CI96 CT025535.1-201ENSMUST00000227172 491 ntBASIC13.72□□□□□ -0.21
Clip4Q8CI96 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms