Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rab11fip3Q8CHD8 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rab11fip3Q8CHD8 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rab11fip3Q8CHD8 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rab11fip3Q8CHD8 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rab11fip3Q8CHD8 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC17.57■□□□□ 0.4
Rab11fip3Q8CHD8 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC17.57■□□□□ 0.4
Rab11fip3Q8CHD8 Gm9728-201ENSMUST00000200197 1055 ntBASIC17.57■□□□□ 0.4
Rab11fip3Q8CHD8 AC125350.2-201ENSMUST00000224737 727 ntBASIC17.57■□□□□ 0.4
Rab11fip3Q8CHD8 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rab11fip3Q8CHD8 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rab11fip3Q8CHD8 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rab11fip3Q8CHD8 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rab11fip3Q8CHD8 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rab11fip3Q8CHD8 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
Rab11fip3Q8CHD8 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rab11fip3Q8CHD8 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rab11fip3Q8CHD8 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Rab11fip3Q8CHD8 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rab11fip3Q8CHD8 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rab11fip3Q8CHD8 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rab11fip3Q8CHD8 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rab11fip3Q8CHD8 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rab11fip3Q8CHD8 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rab11fip3Q8CHD8 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rab11fip3Q8CHD8 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC17.56■□□□□ 0.4
Rab11fip3Q8CHD8 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC17.56■□□□□ 0.4
Rab11fip3Q8CHD8 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rab11fip3Q8CHD8 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC17.56■□□□□ 0.4
Rab11fip3Q8CHD8 Gm27331-201ENSMUST00000183705 60 ntBASIC17.56■□□□□ 0.4
Rab11fip3Q8CHD8 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rab11fip3Q8CHD8 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC17.56■□□□□ 0.4
Rab11fip3Q8CHD8 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Rab11fip3Q8CHD8 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rab11fip3Q8CHD8 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rab11fip3Q8CHD8 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rab11fip3Q8CHD8 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rab11fip3Q8CHD8 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rab11fip3Q8CHD8 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rab11fip3Q8CHD8 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rab11fip3Q8CHD8 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Rab11fip3Q8CHD8 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rab11fip3Q8CHD8 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rab11fip3Q8CHD8 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rab11fip3Q8CHD8 AC131068.2-201ENSMUST00000226175 1453 ntBASIC17.56■□□□□ 0.4
Rab11fip3Q8CHD8 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rab11fip3Q8CHD8 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rab11fip3Q8CHD8 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rab11fip3Q8CHD8 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rab11fip3Q8CHD8 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rab11fip3Q8CHD8 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rab11fip3Q8CHD8 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rab11fip3Q8CHD8 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
Rab11fip3Q8CHD8 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rab11fip3Q8CHD8 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rab11fip3Q8CHD8 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Rab11fip3Q8CHD8 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rab11fip3Q8CHD8 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rab11fip3Q8CHD8 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rab11fip3Q8CHD8 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rab11fip3Q8CHD8 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rab11fip3Q8CHD8 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rab11fip3Q8CHD8 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC17.55■□□□□ 0.4
Rab11fip3Q8CHD8 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC17.55■□□□□ 0.4
Rab11fip3Q8CHD8 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rab11fip3Q8CHD8 Mir1938-201ENSMUST00000158746 100 ntBASIC17.55■□□□□ 0.4
Rab11fip3Q8CHD8 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rab11fip3Q8CHD8 Gm43630-201ENSMUST00000201550 776 ntBASIC17.55■□□□□ 0.4
Rab11fip3Q8CHD8 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC17.55■□□□□ 0.4
Rab11fip3Q8CHD8 Gm29705-201ENSMUST00000212598 474 ntBASIC17.55■□□□□ 0.4
Rab11fip3Q8CHD8 Gm2824-203ENSMUST00000226189 1228 ntBASIC17.55■□□□□ 0.4
Rab11fip3Q8CHD8 AC155237.1-201ENSMUST00000226196 1279 ntBASIC17.55■□□□□ 0.4
Rab11fip3Q8CHD8 AC122459.1-201ENSMUST00000228373 885 ntBASIC17.55■□□□□ 0.4
Rab11fip3Q8CHD8 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rab11fip3Q8CHD8 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rab11fip3Q8CHD8 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rab11fip3Q8CHD8 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rab11fip3Q8CHD8 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rab11fip3Q8CHD8 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rab11fip3Q8CHD8 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rab11fip3Q8CHD8 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rab11fip3Q8CHD8 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rab11fip3Q8CHD8 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rab11fip3Q8CHD8 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rab11fip3Q8CHD8 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rab11fip3Q8CHD8 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rab11fip3Q8CHD8 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rab11fip3Q8CHD8 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rab11fip3Q8CHD8 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC17.54■□□□□ 0.4
Rab11fip3Q8CHD8 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rab11fip3Q8CHD8 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC17.54■□□□□ 0.4
Rab11fip3Q8CHD8 Gm40466-201ENSMUST00000212174 422 ntBASIC17.54■□□□□ 0.4
Rab11fip3Q8CHD8 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rab11fip3Q8CHD8 AC126253.1-201ENSMUST00000227974 824 ntBASIC17.54■□□□□ 0.4
Rab11fip3Q8CHD8 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rab11fip3Q8CHD8 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC17.54■□□□□ 0.4
Rab11fip3Q8CHD8 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rab11fip3Q8CHD8 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rab11fip3Q8CHD8 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rab11fip3Q8CHD8 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms