Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trub1Q8C0D0 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC14.05□□□□□ -0.16
Trub1Q8C0D0 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trub1Q8C0D0 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trub1Q8C0D0 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trub1Q8C0D0 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trub1Q8C0D0 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trub1Q8C0D0 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trub1Q8C0D0 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trub1Q8C0D0 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trub1Q8C0D0 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trub1Q8C0D0 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trub1Q8C0D0 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trub1Q8C0D0 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Trub1Q8C0D0 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trub1Q8C0D0 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC14.05□□□□□ -0.16
Trub1Q8C0D0 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trub1Q8C0D0 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Trub1Q8C0D0 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC14.05□□□□□ -0.16
Trub1Q8C0D0 Wdyhv1-203ENSMUST00000226889 394 ntBASIC14.05□□□□□ -0.16
Trub1Q8C0D0 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trub1Q8C0D0 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trub1Q8C0D0 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trub1Q8C0D0 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trub1Q8C0D0 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trub1Q8C0D0 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trub1Q8C0D0 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC14.05□□□□□ -0.16
Trub1Q8C0D0 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trub1Q8C0D0 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trub1Q8C0D0 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trub1Q8C0D0 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trub1Q8C0D0 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC14.05□□□□□ -0.16
Trub1Q8C0D0 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trub1Q8C0D0 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trub1Q8C0D0 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Trub1Q8C0D0 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trub1Q8C0D0 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Trub1Q8C0D0 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trub1Q8C0D0 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
Trub1Q8C0D0 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trub1Q8C0D0 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trub1Q8C0D0 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trub1Q8C0D0 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC14.04□□□□□ -0.16
Trub1Q8C0D0 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trub1Q8C0D0 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trub1Q8C0D0 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trub1Q8C0D0 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trub1Q8C0D0 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trub1Q8C0D0 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trub1Q8C0D0 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trub1Q8C0D0 Gm22189-201ENSMUST00000103822 86 ntBASIC14.04□□□□□ -0.16
Trub1Q8C0D0 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trub1Q8C0D0 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC14.04□□□□□ -0.16
Trub1Q8C0D0 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trub1Q8C0D0 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC14.04□□□□□ -0.16
Trub1Q8C0D0 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trub1Q8C0D0 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trub1Q8C0D0 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trub1Q8C0D0 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trub1Q8C0D0 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trub1Q8C0D0 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trub1Q8C0D0 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trub1Q8C0D0 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trub1Q8C0D0 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trub1Q8C0D0 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trub1Q8C0D0 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trub1Q8C0D0 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trub1Q8C0D0 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trub1Q8C0D0 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trub1Q8C0D0 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trub1Q8C0D0 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC14.03□□□□□ -0.16
Trub1Q8C0D0 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trub1Q8C0D0 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trub1Q8C0D0 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trub1Q8C0D0 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trub1Q8C0D0 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC14.03□□□□□ -0.16
Trub1Q8C0D0 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trub1Q8C0D0 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC14.03□□□□□ -0.16
Trub1Q8C0D0 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC14.03□□□□□ -0.16
Trub1Q8C0D0 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC14.03□□□□□ -0.16
Trub1Q8C0D0 Gm25925-201ENSMUST00000158314 306 ntBASIC14.03□□□□□ -0.16
Trub1Q8C0D0 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trub1Q8C0D0 Gm5279-201ENSMUST00000199575 745 ntBASIC14.03□□□□□ -0.16
Trub1Q8C0D0 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trub1Q8C0D0 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC14.03□□□□□ -0.16
Trub1Q8C0D0 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trub1Q8C0D0 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trub1Q8C0D0 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC14.03□□□□□ -0.16
Trub1Q8C0D0 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trub1Q8C0D0 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trub1Q8C0D0 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trub1Q8C0D0 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trub1Q8C0D0 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trub1Q8C0D0 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trub1Q8C0D0 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trub1Q8C0D0 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Trub1Q8C0D0 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trub1Q8C0D0 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trub1Q8C0D0 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
Trub1Q8C0D0 Gm38346-201ENSMUST00000192379 2639 ntBASIC14.02□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms