Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Smco3Q8BQM7 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Smco3Q8BQM7 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.62
Smco3Q8BQM7 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Smco3Q8BQM7 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Smco3Q8BQM7 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Smco3Q8BQM7 Gm45638-201ENSMUST00000211507 2878 ntBASIC11.21□□□□□ -0.62
Smco3Q8BQM7 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Smco3Q8BQM7 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Smco3Q8BQM7 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Smco3Q8BQM7 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Smco3Q8BQM7 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Smco3Q8BQM7 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Smco3Q8BQM7 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Smco3Q8BQM7 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Smco3Q8BQM7 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Smco3Q8BQM7 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC11.2□□□□□ -0.62
Smco3Q8BQM7 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Smco3Q8BQM7 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Smco3Q8BQM7 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Smco3Q8BQM7 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Smco3Q8BQM7 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Smco3Q8BQM7 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Smco3Q8BQM7 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC11.2□□□□□ -0.62
Smco3Q8BQM7 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Smco3Q8BQM7 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Smco3Q8BQM7 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC11.2□□□□□ -0.62
Smco3Q8BQM7 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Smco3Q8BQM7 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Smco3Q8BQM7 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC11.2□□□□□ -0.62
Smco3Q8BQM7 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Smco3Q8BQM7 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Smco3Q8BQM7 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Smco3Q8BQM7 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Smco3Q8BQM7 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Smco3Q8BQM7 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Smco3Q8BQM7 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC11.2□□□□□ -0.62
Smco3Q8BQM7 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Smco3Q8BQM7 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
Smco3Q8BQM7 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC11.2□□□□□ -0.62
Smco3Q8BQM7 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC11.2□□□□□ -0.62
Smco3Q8BQM7 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Smco3Q8BQM7 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Smco3Q8BQM7 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Smco3Q8BQM7 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Smco3Q8BQM7 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Smco3Q8BQM7 Ntrk2-204ENSMUST00000224259 3049 ntBASIC11.2□□□□□ -0.62
Smco3Q8BQM7 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Smco3Q8BQM7 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Smco3Q8BQM7 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Smco3Q8BQM7 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Smco3Q8BQM7 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Smco3Q8BQM7 Gm37861-201ENSMUST00000193534 2869 ntBASIC11.2□□□□□ -0.62
Smco3Q8BQM7 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Smco3Q8BQM7 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Smco3Q8BQM7 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Smco3Q8BQM7 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Smco3Q8BQM7 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Smco3Q8BQM7 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Smco3Q8BQM7 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Smco3Q8BQM7 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Smco3Q8BQM7 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Smco3Q8BQM7 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC11.19□□□□□ -0.62
Smco3Q8BQM7 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smco3Q8BQM7 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smco3Q8BQM7 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Smco3Q8BQM7 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC11.19□□□□□ -0.62
Smco3Q8BQM7 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
Smco3Q8BQM7 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC11.19□□□□□ -0.62
Smco3Q8BQM7 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Smco3Q8BQM7 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smco3Q8BQM7 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smco3Q8BQM7 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smco3Q8BQM7 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smco3Q8BQM7 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smco3Q8BQM7 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smco3Q8BQM7 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Smco3Q8BQM7 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smco3Q8BQM7 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Smco3Q8BQM7 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smco3Q8BQM7 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC11.19□□□□□ -0.62
Smco3Q8BQM7 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Smco3Q8BQM7 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smco3Q8BQM7 Klk2-ps-201ENSMUST00000205342 571 ntBASIC11.19□□□□□ -0.62
Smco3Q8BQM7 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smco3Q8BQM7 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smco3Q8BQM7 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smco3Q8BQM7 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smco3Q8BQM7 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Smco3Q8BQM7 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smco3Q8BQM7 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC11.19□□□□□ -0.62
Smco3Q8BQM7 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smco3Q8BQM7 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smco3Q8BQM7 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smco3Q8BQM7 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smco3Q8BQM7 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smco3Q8BQM7 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smco3Q8BQM7 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smco3Q8BQM7 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Smco3Q8BQM7 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms