Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Col16a1Q8BLX7 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC17.52■□□□□ 0.39
Col16a1Q8BLX7 Gm9678-201ENSMUST00000198979 1149 ntBASIC17.52■□□□□ 0.39
Col16a1Q8BLX7 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC17.52■□□□□ 0.39
Col16a1Q8BLX7 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Col16a1Q8BLX7 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Col16a1Q8BLX7 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Col16a1Q8BLX7 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Col16a1Q8BLX7 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Col16a1Q8BLX7 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Col16a1Q8BLX7 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Col16a1Q8BLX7 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Col16a1Q8BLX7 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col16a1Q8BLX7 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Col16a1Q8BLX7 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col16a1Q8BLX7 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col16a1Q8BLX7 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col16a1Q8BLX7 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col16a1Q8BLX7 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col16a1Q8BLX7 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC17.51■□□□□ 0.39
Col16a1Q8BLX7 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Col16a1Q8BLX7 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col16a1Q8BLX7 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col16a1Q8BLX7 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col16a1Q8BLX7 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col16a1Q8BLX7 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Col16a1Q8BLX7 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Col16a1Q8BLX7 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Col16a1Q8BLX7 Gm5523-201ENSMUST00000180415 997 ntBASIC17.51■□□□□ 0.39
Col16a1Q8BLX7 Mir6927-201ENSMUST00000184494 71 ntBASIC17.51■□□□□ 0.39
Col16a1Q8BLX7 AC135669.1-202ENSMUST00000216742 540 ntBASIC17.51■□□□□ 0.39
Col16a1Q8BLX7 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC17.51■□□□□ 0.39
Col16a1Q8BLX7 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col16a1Q8BLX7 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col16a1Q8BLX7 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Col16a1Q8BLX7 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
Col16a1Q8BLX7 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col16a1Q8BLX7 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col16a1Q8BLX7 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col16a1Q8BLX7 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Col16a1Q8BLX7 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col16a1Q8BLX7 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col16a1Q8BLX7 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC17.51■□□□□ 0.39
Col16a1Q8BLX7 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Col16a1Q8BLX7 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Col16a1Q8BLX7 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Col16a1Q8BLX7 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col16a1Q8BLX7 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col16a1Q8BLX7 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC17.5■□□□□ 0.39
Col16a1Q8BLX7 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col16a1Q8BLX7 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
Col16a1Q8BLX7 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Col16a1Q8BLX7 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC17.5■□□□□ 0.39
Col16a1Q8BLX7 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col16a1Q8BLX7 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
Col16a1Q8BLX7 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC17.5■□□□□ 0.39
Col16a1Q8BLX7 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC17.5■□□□□ 0.39
Col16a1Q8BLX7 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC17.5■□□□□ 0.39
Col16a1Q8BLX7 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col16a1Q8BLX7 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Col16a1Q8BLX7 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col16a1Q8BLX7 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col16a1Q8BLX7 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Col16a1Q8BLX7 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Col16a1Q8BLX7 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.5■□□□□ 0.39
Col16a1Q8BLX7 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Col16a1Q8BLX7 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col16a1Q8BLX7 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col16a1Q8BLX7 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col16a1Q8BLX7 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col16a1Q8BLX7 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Col16a1Q8BLX7 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col16a1Q8BLX7 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col16a1Q8BLX7 Gm19221-201ENSMUST00000221827 1477 ntBASIC17.49■□□□□ 0.39
Col16a1Q8BLX7 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Col16a1Q8BLX7 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC17.49■□□□□ 0.39
Col16a1Q8BLX7 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC17.49■□□□□ 0.39
Col16a1Q8BLX7 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC17.49■□□□□ 0.39
Col16a1Q8BLX7 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Col16a1Q8BLX7 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col16a1Q8BLX7 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col16a1Q8BLX7 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col16a1Q8BLX7 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Col16a1Q8BLX7 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col16a1Q8BLX7 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Col16a1Q8BLX7 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC17.49■□□□□ 0.39
Col16a1Q8BLX7 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col16a1Q8BLX7 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col16a1Q8BLX7 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col16a1Q8BLX7 Gm17208-201ENSMUST00000168388 535 ntBASIC17.49■□□□□ 0.39
Col16a1Q8BLX7 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col16a1Q8BLX7 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Col16a1Q8BLX7 Gm26956-201ENSMUST00000182176 986 ntBASIC17.49■□□□□ 0.39
Col16a1Q8BLX7 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Col16a1Q8BLX7 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC17.49■□□□□ 0.39
Col16a1Q8BLX7 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC17.49■□□□□ 0.39
Col16a1Q8BLX7 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Col16a1Q8BLX7 Gm10702-201ENSMUST00000098929 1268 ntBASIC17.49■□□□□ 0.39
Col16a1Q8BLX7 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Col16a1Q8BLX7 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms