Protein–RNA interactions for Protein: Q8BGE6

Atg4b, Cysteine protease ATG4B, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4bQ8BGE6 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Atg4bQ8BGE6 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12.84□□□□□ -0.35
Atg4bQ8BGE6 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Atg4bQ8BGE6 Gm2423-201ENSMUST00000074863 733 ntBASIC12.84□□□□□ -0.35
Atg4bQ8BGE6 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Atg4bQ8BGE6 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Atg4bQ8BGE6 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12.84□□□□□ -0.35
Atg4bQ8BGE6 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Atg4bQ8BGE6 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Atg4bQ8BGE6 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC12.84□□□□□ -0.35
Atg4bQ8BGE6 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Atg4bQ8BGE6 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Atg4bQ8BGE6 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Atg4bQ8BGE6 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Atg4bQ8BGE6 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Atg4bQ8BGE6 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Atg4bQ8BGE6 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Atg4bQ8BGE6 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Atg4bQ8BGE6 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Atg4bQ8BGE6 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Atg4bQ8BGE6 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.84□□□□□ -0.35
Atg4bQ8BGE6 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC12.84□□□□□ -0.35
Atg4bQ8BGE6 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Atg4bQ8BGE6 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Atg4bQ8BGE6 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Atg4bQ8BGE6 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Atg4bQ8BGE6 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.83□□□□□ -0.36
Atg4bQ8BGE6 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC12.83□□□□□ -0.36
Atg4bQ8BGE6 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Atg4bQ8BGE6 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Atg4bQ8BGE6 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Atg4bQ8BGE6 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Atg4bQ8BGE6 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Atg4bQ8BGE6 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.83□□□□□ -0.36
Atg4bQ8BGE6 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Atg4bQ8BGE6 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Atg4bQ8BGE6 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Atg4bQ8BGE6 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Atg4bQ8BGE6 Gm15770-201ENSMUST00000117498 584 ntBASIC12.83□□□□□ -0.36
Atg4bQ8BGE6 Gm14730-201ENSMUST00000122378 1045 ntBASIC12.83□□□□□ -0.36
Atg4bQ8BGE6 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Atg4bQ8BGE6 Gm43094-201ENSMUST00000196549 921 ntBASIC12.83□□□□□ -0.36
Atg4bQ8BGE6 Gm7498-201ENSMUST00000203282 1084 ntBASIC12.83□□□□□ -0.36
Atg4bQ8BGE6 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Atg4bQ8BGE6 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Atg4bQ8BGE6 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Atg4bQ8BGE6 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Atg4bQ8BGE6 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Atg4bQ8BGE6 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Atg4bQ8BGE6 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Atg4bQ8BGE6 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Atg4bQ8BGE6 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Atg4bQ8BGE6 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Atg4bQ8BGE6 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Atg4bQ8BGE6 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Atg4bQ8BGE6 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Atg4bQ8BGE6 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Atg4bQ8BGE6 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Atg4bQ8BGE6 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Atg4bQ8BGE6 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC12.83□□□□□ -0.36
Atg4bQ8BGE6 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC12.83□□□□□ -0.36
Atg4bQ8BGE6 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Atg4bQ8BGE6 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC12.82□□□□□ -0.36
Atg4bQ8BGE6 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
Atg4bQ8BGE6 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Atg4bQ8BGE6 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Atg4bQ8BGE6 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Atg4bQ8BGE6 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Atg4bQ8BGE6 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Atg4bQ8BGE6 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Atg4bQ8BGE6 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Atg4bQ8BGE6 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Atg4bQ8BGE6 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Atg4bQ8BGE6 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Atg4bQ8BGE6 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.82□□□□□ -0.36
Atg4bQ8BGE6 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Atg4bQ8BGE6 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC12.82□□□□□ -0.36
Atg4bQ8BGE6 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Atg4bQ8BGE6 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC12.82□□□□□ -0.36
Atg4bQ8BGE6 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC12.82□□□□□ -0.36
Atg4bQ8BGE6 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Atg4bQ8BGE6 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Atg4bQ8BGE6 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC12.82□□□□□ -0.36
Atg4bQ8BGE6 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Atg4bQ8BGE6 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Atg4bQ8BGE6 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Atg4bQ8BGE6 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Atg4bQ8BGE6 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Atg4bQ8BGE6 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC12.82□□□□□ -0.36
Atg4bQ8BGE6 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Atg4bQ8BGE6 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Atg4bQ8BGE6 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Atg4bQ8BGE6 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Atg4bQ8BGE6 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Atg4bQ8BGE6 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Atg4bQ8BGE6 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Atg4bQ8BGE6 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Atg4bQ8BGE6 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Atg4bQ8BGE6 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Atg4bQ8BGE6 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms