Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ush1gQ80T11 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ush1gQ80T11 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.89□□□□□ -0.03
Ush1gQ80T11 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC14.89□□□□□ -0.03
Ush1gQ80T11 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ush1gQ80T11 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ush1gQ80T11 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
Ush1gQ80T11 Gm13050-201ENSMUST00000122149 1345 ntBASIC14.89□□□□□ -0.03
Ush1gQ80T11 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC14.89□□□□□ -0.03
Ush1gQ80T11 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ush1gQ80T11 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ush1gQ80T11 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ush1gQ80T11 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ush1gQ80T11 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ush1gQ80T11 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
Ush1gQ80T11 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ush1gQ80T11 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ush1gQ80T11 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ush1gQ80T11 Gm21038-201ENSMUST00000222205 1383 ntBASIC14.88□□□□□ -0.03
Ush1gQ80T11 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ush1gQ80T11 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ush1gQ80T11 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ush1gQ80T11 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ush1gQ80T11 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ush1gQ80T11 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ush1gQ80T11 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ush1gQ80T11 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC14.88□□□□□ -0.03
Ush1gQ80T11 Gm13612-201ENSMUST00000119276 390 ntBASIC14.88□□□□□ -0.03
Ush1gQ80T11 Gm24644-201ENSMUST00000157114 139 ntBASIC14.88□□□□□ -0.03
Ush1gQ80T11 Gm8801-201ENSMUST00000173255 1064 ntBASIC14.88□□□□□ -0.03
Ush1gQ80T11 Gm27572-201ENSMUST00000183702 255 ntBASIC14.88□□□□□ -0.03
Ush1gQ80T11 AC166997.1-201ENSMUST00000225122 572 ntBASIC14.88□□□□□ -0.03
Ush1gQ80T11 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ush1gQ80T11 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ush1gQ80T11 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Ush1gQ80T11 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ush1gQ80T11 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC14.88□□□□□ -0.03
Ush1gQ80T11 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Ush1gQ80T11 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC14.88□□□□□ -0.03
Ush1gQ80T11 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Ush1gQ80T11 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ush1gQ80T11 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Ush1gQ80T11 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC14.88□□□□□ -0.03
Ush1gQ80T11 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Ush1gQ80T11 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Ush1gQ80T11 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ush1gQ80T11 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ush1gQ80T11 Gm18222-201ENSMUST00000202416 1387 ntBASIC14.87□□□□□ -0.03
Ush1gQ80T11 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ush1gQ80T11 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ush1gQ80T11 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ush1gQ80T11 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ush1gQ80T11 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ush1gQ80T11 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ush1gQ80T11 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ush1gQ80T11 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ush1gQ80T11 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ush1gQ80T11 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ush1gQ80T11 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ush1gQ80T11 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ush1gQ80T11 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ush1gQ80T11 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ush1gQ80T11 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC14.87□□□□□ -0.03
Ush1gQ80T11 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
Ush1gQ80T11 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC14.87□□□□□ -0.03
Ush1gQ80T11 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ush1gQ80T11 Gm43818-201ENSMUST00000200605 466 ntBASIC14.87□□□□□ -0.03
Ush1gQ80T11 Gm40466-201ENSMUST00000212174 422 ntBASIC14.87□□□□□ -0.03
Ush1gQ80T11 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC14.87□□□□□ -0.03
Ush1gQ80T11 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC14.87□□□□□ -0.03
Ush1gQ80T11 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC14.87□□□□□ -0.03
Ush1gQ80T11 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ush1gQ80T11 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ush1gQ80T11 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC14.87□□□□□ -0.03
Ush1gQ80T11 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC14.87□□□□□ -0.03
Ush1gQ80T11 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ush1gQ80T11 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ush1gQ80T11 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ush1gQ80T11 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ush1gQ80T11 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC14.87□□□□□ -0.03
Ush1gQ80T11 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ush1gQ80T11 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ush1gQ80T11 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ush1gQ80T11 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ush1gQ80T11 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC14.86□□□□□ -0.03
Ush1gQ80T11 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ush1gQ80T11 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ush1gQ80T11 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ush1gQ80T11 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ush1gQ80T11 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14.86□□□□□ -0.03
Ush1gQ80T11 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ush1gQ80T11 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ush1gQ80T11 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ush1gQ80T11 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ush1gQ80T11 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ush1gQ80T11 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ush1gQ80T11 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ush1gQ80T11 Gm13689-201ENSMUST00000119360 685 ntBASIC14.86□□□□□ -0.03
Ush1gQ80T11 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC14.86□□□□□ -0.03
Ush1gQ80T11 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms