Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sp140Q6NSQ5 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sp140Q6NSQ5 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sp140Q6NSQ5 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sp140Q6NSQ5 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sp140Q6NSQ5 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC13.83□□□□□ -0.2
Sp140Q6NSQ5 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC13.83□□□□□ -0.2
Sp140Q6NSQ5 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Sp140Q6NSQ5 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC13.83□□□□□ -0.2
Sp140Q6NSQ5 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Sp140Q6NSQ5 Gm27306-201ENSMUST00000183970 107 ntBASIC13.83□□□□□ -0.2
Sp140Q6NSQ5 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC13.83□□□□□ -0.2
Sp140Q6NSQ5 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Sp140Q6NSQ5 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC13.83□□□□□ -0.2
Sp140Q6NSQ5 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sp140Q6NSQ5 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sp140Q6NSQ5 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sp140Q6NSQ5 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.83□□□□□ -0.2
Sp140Q6NSQ5 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sp140Q6NSQ5 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sp140Q6NSQ5 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Sp140Q6NSQ5 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Sp140Q6NSQ5 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sp140Q6NSQ5 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sp140Q6NSQ5 Gm13859-201ENSMUST00000119936 1423 ntBASIC13.82□□□□□ -0.2
Sp140Q6NSQ5 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sp140Q6NSQ5 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC13.82□□□□□ -0.2
Sp140Q6NSQ5 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Sp140Q6NSQ5 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sp140Q6NSQ5 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.82□□□□□ -0.2
Sp140Q6NSQ5 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Sp140Q6NSQ5 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sp140Q6NSQ5 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Sp140Q6NSQ5 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.82□□□□□ -0.2
Sp140Q6NSQ5 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sp140Q6NSQ5 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sp140Q6NSQ5 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Sp140Q6NSQ5 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sp140Q6NSQ5 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
Sp140Q6NSQ5 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Sp140Q6NSQ5 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC13.82□□□□□ -0.2
Sp140Q6NSQ5 Gm24420-201ENSMUST00000176676 59 ntBASIC13.82□□□□□ -0.2
Sp140Q6NSQ5 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sp140Q6NSQ5 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Sp140Q6NSQ5 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sp140Q6NSQ5 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC13.82□□□□□ -0.2
Sp140Q6NSQ5 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sp140Q6NSQ5 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sp140Q6NSQ5 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Sp140Q6NSQ5 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Sp140Q6NSQ5 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Sp140Q6NSQ5 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sp140Q6NSQ5 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sp140Q6NSQ5 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sp140Q6NSQ5 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sp140Q6NSQ5 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sp140Q6NSQ5 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sp140Q6NSQ5 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sp140Q6NSQ5 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sp140Q6NSQ5 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sp140Q6NSQ5 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Sp140Q6NSQ5 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Sp140Q6NSQ5 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sp140Q6NSQ5 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sp140Q6NSQ5 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sp140Q6NSQ5 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.81□□□□□ -0.2
Sp140Q6NSQ5 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.81□□□□□ -0.2
Sp140Q6NSQ5 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.81□□□□□ -0.2
Sp140Q6NSQ5 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.81□□□□□ -0.2
Sp140Q6NSQ5 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Sp140Q6NSQ5 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sp140Q6NSQ5 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Sp140Q6NSQ5 AC139350.1-201ENSMUST00000227064 1594 ntBASIC13.81□□□□□ -0.2
Sp140Q6NSQ5 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC13.81□□□□□ -0.2
Sp140Q6NSQ5 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sp140Q6NSQ5 Gm12151-201ENSMUST00000121374 290 ntBASIC13.81□□□□□ -0.2
Sp140Q6NSQ5 Gm5425-201ENSMUST00000214125 459 ntBASIC13.81□□□□□ -0.2
Sp140Q6NSQ5 AC238811.1-201ENSMUST00000225302 441 ntBASIC13.81□□□□□ -0.2
Sp140Q6NSQ5 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sp140Q6NSQ5 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sp140Q6NSQ5 Gm5867-201ENSMUST00000063197 592 ntBASIC13.81□□□□□ -0.2
Sp140Q6NSQ5 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sp140Q6NSQ5 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sp140Q6NSQ5 Gm14452-201ENSMUST00000118680 1632 ntBASIC13.81□□□□□ -0.2
Sp140Q6NSQ5 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sp140Q6NSQ5 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC13.81□□□□□ -0.2
Sp140Q6NSQ5 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.81□□□□□ -0.2
Sp140Q6NSQ5 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sp140Q6NSQ5 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Sp140Q6NSQ5 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC13.81□□□□□ -0.2
Sp140Q6NSQ5 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC13.81□□□□□ -0.2
Sp140Q6NSQ5 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sp140Q6NSQ5 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sp140Q6NSQ5 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.81□□□□□ -0.2
Sp140Q6NSQ5 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sp140Q6NSQ5 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC13.81□□□□□ -0.2
Sp140Q6NSQ5 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sp140Q6NSQ5 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sp140Q6NSQ5 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sp140Q6NSQ5 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms