Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Col11a2Q64739 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC16.11■□□□□ 0.17
Col11a2Q64739 D9Wsu149-201ENSMUST00000214169 594 ntBASIC16.11■□□□□ 0.17
Col11a2Q64739 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Col11a2Q64739 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Col11a2Q64739 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC16.1■□□□□ 0.17
Col11a2Q64739 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Col11a2Q64739 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Col11a2Q64739 Gm11960-202ENSMUST00000181063 2858 ntBASIC16.1■□□□□ 0.17
Col11a2Q64739 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC16.1■□□□□ 0.17
Col11a2Q64739 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Col11a2Q64739 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC16.1■□□□□ 0.17
Col11a2Q64739 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Col11a2Q64739 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Col11a2Q64739 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Col11a2Q64739 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Col11a2Q64739 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Col11a2Q64739 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Col11a2Q64739 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Col11a2Q64739 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
Col11a2Q64739 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Col11a2Q64739 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Col11a2Q64739 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Col11a2Q64739 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col11a2Q64739 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Col11a2Q64739 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Col11a2Q64739 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col11a2Q64739 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Col11a2Q64739 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Col11a2Q64739 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col11a2Q64739 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col11a2Q64739 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC16.09■□□□□ 0.17
Col11a2Q64739 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col11a2Q64739 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col11a2Q64739 Gm24845-201ENSMUST00000158034 109 ntBASIC16.09■□□□□ 0.17
Col11a2Q64739 Gm27552-201ENSMUST00000183351 62 ntBASIC16.09■□□□□ 0.17
Col11a2Q64739 Gm27844-201ENSMUST00000183613 62 ntBASIC16.09■□□□□ 0.17
Col11a2Q64739 AC135669.1-202ENSMUST00000216742 540 ntBASIC16.09■□□□□ 0.17
Col11a2Q64739 Gzmn-202ENSMUST00000225535 989 ntBASIC16.09■□□□□ 0.17
Col11a2Q64739 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col11a2Q64739 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Col11a2Q64739 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col11a2Q64739 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Col11a2Q64739 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Col11a2Q64739 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col11a2Q64739 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col11a2Q64739 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Col11a2Q64739 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col11a2Q64739 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC16.09■□□□□ 0.17
Col11a2Q64739 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col11a2Q64739 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Col11a2Q64739 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Col11a2Q64739 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col11a2Q64739 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Col11a2Q64739 Gm42872-201ENSMUST00000200026 1967 ntBASIC16.09■□□□□ 0.17
Col11a2Q64739 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
Col11a2Q64739 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Col11a2Q64739 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.17
Col11a2Q64739 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Col11a2Q64739 Gm8566-201ENSMUST00000120174 465 ntBASIC16.08■□□□□ 0.17
Col11a2Q64739 Gm37666-201ENSMUST00000194110 866 ntBASIC16.08■□□□□ 0.17
Col11a2Q64739 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC16.08■□□□□ 0.17
Col11a2Q64739 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC16.08■□□□□ 0.17
Col11a2Q64739 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Col11a2Q64739 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Col11a2Q64739 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col11a2Q64739 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col11a2Q64739 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col11a2Q64739 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC16.08■□□□□ 0.16
Col11a2Q64739 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col11a2Q64739 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC16.08■□□□□ 0.16
Col11a2Q64739 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col11a2Q64739 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col11a2Q64739 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col11a2Q64739 Gm12380-201ENSMUST00000119012 544 ntBASIC16.08■□□□□ 0.16
Col11a2Q64739 Gm23363-201ENSMUST00000175024 79 ntBASIC16.08■□□□□ 0.16
Col11a2Q64739 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC16.08■□□□□ 0.16
Col11a2Q64739 Gm45118-201ENSMUST00000208928 825 ntBASIC16.08■□□□□ 0.16
Col11a2Q64739 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Col11a2Q64739 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC16.08■□□□□ 0.16
Col11a2Q64739 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Col11a2Q64739 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col11a2Q64739 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Col11a2Q64739 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC16.08■□□□□ 0.16
Col11a2Q64739 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Col11a2Q64739 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col11a2Q64739 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col11a2Q64739 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col11a2Q64739 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Col11a2Q64739 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Col11a2Q64739 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col11a2Q64739 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col11a2Q64739 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col11a2Q64739 Gm26513-201ENSMUST00000181802 2489 ntBASIC16.07■□□□□ 0.16
Col11a2Q64739 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col11a2Q64739 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col11a2Q64739 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Col11a2Q64739 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Col11a2Q64739 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC16.07■□□□□ 0.16
Col11a2Q64739 Gm12286-201ENSMUST00000119246 1002 ntBASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms