Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Trim27Q62158 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim27Q62158 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
Trim27Q62158 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim27Q62158 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim27Q62158 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim27Q62158 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC16.71■□□□□ 0.27
Trim27Q62158 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim27Q62158 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim27Q62158 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trim27Q62158 Gm15678-201ENSMUST00000117573 960 ntBASIC16.71■□□□□ 0.27
Trim27Q62158 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trim27Q62158 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Trim27Q62158 Gm5354-201ENSMUST00000182417 973 ntBASIC16.71■□□□□ 0.27
Trim27Q62158 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC16.71■□□□□ 0.27
Trim27Q62158 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Trim27Q62158 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim27Q62158 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim27Q62158 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim27Q62158 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim27Q62158 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim27Q62158 AC154527.2-201ENSMUST00000225256 1466 ntBASIC16.71■□□□□ 0.27
Trim27Q62158 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim27Q62158 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trim27Q62158 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trim27Q62158 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim27Q62158 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trim27Q62158 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trim27Q62158 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Trim27Q62158 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trim27Q62158 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Trim27Q62158 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Trim27Q62158 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Trim27Q62158 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC16.71■□□□□ 0.26
Trim27Q62158 Gm45779-201ENSMUST00000212189 4064 ntBASIC16.7■□□□□ 0.26
Trim27Q62158 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC16.7■□□□□ 0.26
Trim27Q62158 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim27Q62158 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim27Q62158 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim27Q62158 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim27Q62158 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Trim27Q62158 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim27Q62158 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim27Q62158 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim27Q62158 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC16.7■□□□□ 0.26
Trim27Q62158 Ldha-ps-201ENSMUST00000119390 995 ntBASIC16.7■□□□□ 0.26
Trim27Q62158 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Trim27Q62158 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim27Q62158 Gm29608-201ENSMUST00000190444 463 ntBASIC16.7■□□□□ 0.26
Trim27Q62158 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC16.7■□□□□ 0.26
Trim27Q62158 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim27Q62158 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim27Q62158 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Trim27Q62158 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim27Q62158 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trim27Q62158 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Trim27Q62158 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Trim27Q62158 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trim27Q62158 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Trim27Q62158 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim27Q62158 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Trim27Q62158 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim27Q62158 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim27Q62158 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim27Q62158 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim27Q62158 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim27Q62158 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trim27Q62158 Syt7-205ENSMUST00000224135 1557 ntBASIC16.69■□□□□ 0.26
Trim27Q62158 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim27Q62158 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim27Q62158 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim27Q62158 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim27Q62158 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC16.69■□□□□ 0.26
Trim27Q62158 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC16.69■□□□□ 0.26
Trim27Q62158 Gm27437-201ENSMUST00000183429 107 ntBASIC16.69■□□□□ 0.26
Trim27Q62158 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC16.69■□□□□ 0.26
Trim27Q62158 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC16.69■□□□□ 0.26
Trim27Q62158 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim27Q62158 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim27Q62158 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC16.69■□□□□ 0.26
Trim27Q62158 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC16.69■□□□□ 0.26
Trim27Q62158 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trim27Q62158 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Trim27Q62158 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Trim27Q62158 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC16.69■□□□□ 0.26
Trim27Q62158 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim27Q62158 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Trim27Q62158 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim27Q62158 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim27Q62158 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trim27Q62158 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim27Q62158 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim27Q62158 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Trim27Q62158 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim27Q62158 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC16.69■□□□□ 0.26
Trim27Q62158 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim27Q62158 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trim27Q62158 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC16.68■□□□□ 0.26
Trim27Q62158 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC16.68■□□□□ 0.26
Trim27Q62158 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms