Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vsx2Q61412 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.3□□□□□ -0.28
Vsx2Q61412 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.3□□□□□ -0.28
Vsx2Q61412 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.3□□□□□ -0.28
Vsx2Q61412 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC13.3□□□□□ -0.28
Vsx2Q61412 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Vsx2Q61412 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC13.3□□□□□ -0.28
Vsx2Q61412 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vsx2Q61412 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vsx2Q61412 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Vsx2Q61412 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vsx2Q61412 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Vsx2Q61412 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vsx2Q61412 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vsx2Q61412 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vsx2Q61412 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vsx2Q61412 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vsx2Q61412 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Vsx2Q61412 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vsx2Q61412 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vsx2Q61412 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Vsx2Q61412 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vsx2Q61412 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vsx2Q61412 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vsx2Q61412 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Vsx2Q61412 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Vsx2Q61412 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC13.29□□□□□ -0.28
Vsx2Q61412 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC13.29□□□□□ -0.28
Vsx2Q61412 Gm6283-201ENSMUST00000182369 1000 ntBASIC13.29□□□□□ -0.28
Vsx2Q61412 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Vsx2Q61412 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC13.29□□□□□ -0.28
Vsx2Q61412 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Vsx2Q61412 Gm6218-201ENSMUST00000219812 628 ntBASIC13.29□□□□□ -0.28
Vsx2Q61412 Grk6-205ENSMUST00000224653 2976 ntBASIC13.29□□□□□ -0.28
Vsx2Q61412 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vsx2Q61412 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vsx2Q61412 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vsx2Q61412 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vsx2Q61412 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC13.29□□□□□ -0.28
Vsx2Q61412 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vsx2Q61412 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
Vsx2Q61412 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vsx2Q61412 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC13.29□□□□□ -0.28
Vsx2Q61412 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Vsx2Q61412 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Vsx2Q61412 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.28□□□□□ -0.28
Vsx2Q61412 Gm9347-201ENSMUST00000211473 1607 ntBASIC13.28□□□□□ -0.28
Vsx2Q61412 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vsx2Q61412 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Vsx2Q61412 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Vsx2Q61412 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13.28□□□□□ -0.28
Vsx2Q61412 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vsx2Q61412 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vsx2Q61412 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vsx2Q61412 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Vsx2Q61412 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC13.28□□□□□ -0.28
Vsx2Q61412 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC13.28□□□□□ -0.28
Vsx2Q61412 Wdyhv1-206ENSMUST00000227142 786 ntBASIC13.28□□□□□ -0.28
Vsx2Q61412 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vsx2Q61412 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vsx2Q61412 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Vsx2Q61412 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vsx2Q61412 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vsx2Q61412 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vsx2Q61412 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vsx2Q61412 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vsx2Q61412 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vsx2Q61412 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vsx2Q61412 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Vsx2Q61412 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Vsx2Q61412 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Vsx2Q61412 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Vsx2Q61412 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Vsx2Q61412 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Vsx2Q61412 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Vsx2Q61412 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC13.27□□□□□ -0.28
Vsx2Q61412 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Vsx2Q61412 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Vsx2Q61412 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Vsx2Q61412 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Vsx2Q61412 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Vsx2Q61412 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Vsx2Q61412 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Vsx2Q61412 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
Vsx2Q61412 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Vsx2Q61412 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Vsx2Q61412 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC13.27□□□□□ -0.29
Vsx2Q61412 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC13.27□□□□□ -0.29
Vsx2Q61412 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Vsx2Q61412 Gm4804-201ENSMUST00000182234 999 ntBASIC13.27□□□□□ -0.29
Vsx2Q61412 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC13.27□□□□□ -0.29
Vsx2Q61412 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Vsx2Q61412 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vsx2Q61412 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vsx2Q61412 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vsx2Q61412 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Vsx2Q61412 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vsx2Q61412 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vsx2Q61412 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vsx2Q61412 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms